Hb_000179_140

Information

Type -
Description -
Location Contig179: 120171-126895
Sequence    

Annotation

kegg
ID rcu:RCOM_1046030
description phosphatidylcholine-sterol O-acyltransferase, putative (EC:2.3.1.158)
nr
ID NP_001292930.1
description phospholipid:diacylglycerol acyltransferase 1-like [Jatropha curcas]
swissprot
ID Q9FNA9
description Phospholipid:diacylglycerol acyltransferase 1 OS=Arabidopsis thaliana GN=PDAT1 PE=2 SV=1
trembl
ID H6TBK7
description Phospholipid:diacylglycerol acyltransferase OS=Jatropha curcas GN=PDAT PE=2 SV=1
Gene Ontology
ID GO:0008374
description phospholipid:diacylglycerol acyltransferase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17282: 124691-126864
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000179_140 0.0 - - phospholipid:diacylglycerol acyltransferase 1-like [Jatropha curcas]
2 Hb_017987_020 0.1058221022 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002431_020 0.1123802496 - - PREDICTED: F-box protein SKP2A [Jatropha curcas]
4 Hb_002636_180 0.1143404033 - - inositol or phosphatidylinositol kinase, putative [Ricinus communis]
5 Hb_143243_010 0.117644757 - - PREDICTED: uncharacterized protein LOC105644190 [Jatropha curcas]
6 Hb_132697_010 0.1196061275 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002400_310 0.1197726898 - - hypothetical protein JCGZ_07138 [Jatropha curcas]
8 Hb_000523_040 0.1240198537 - - PREDICTED: auxin response factor 8 isoform X1 [Jatropha curcas]
9 Hb_007101_170 0.1272144372 - - hypothetical protein POPTR_0010s10490g [Populus trichocarpa]
10 Hb_001502_060 0.1285822282 - - DNA mismatch repair protein MSH2, putative [Ricinus communis]
11 Hb_006586_050 0.1304118991 - - PREDICTED: probable protein phosphatase 2C 39 [Jatropha curcas]
12 Hb_002890_090 0.1321162458 - - Auxin response factor 1 [Glycine soja]
13 Hb_003455_020 0.1327862139 - - PREDICTED: transportin-1 [Jatropha curcas]
14 Hb_000676_110 0.1352082559 - - glycosyl transferase family 1 family protein [Populus trichocarpa]
15 Hb_005065_010 0.1357265812 - - PREDICTED: probable E3 ubiquitin-protein ligase ARI11 [Jatropha curcas]
16 Hb_000418_070 0.1375265083 - - auxin:hydrogen symporter, putative [Ricinus communis]
17 Hb_000836_270 0.1383014302 - - PREDICTED: mitogen-activated protein kinase homolog MMK2 [Jatropha curcas]
18 Hb_000366_120 0.138540625 - - PREDICTED: chaperone protein dnaJ 49-like [Jatropha curcas]
19 Hb_000483_380 0.1407946956 - - PREDICTED: bax inhibitor 1-like [Jatropha curcas]
20 Hb_002601_120 0.1418470961 - - PREDICTED: uncharacterized protein LOC105634921 [Jatropha curcas]

Gene co-expression network

sample Hb_000179_140 Hb_000179_140 Hb_017987_020 Hb_017987_020 Hb_000179_140--Hb_017987_020 Hb_002431_020 Hb_002431_020 Hb_000179_140--Hb_002431_020 Hb_002636_180 Hb_002636_180 Hb_000179_140--Hb_002636_180 Hb_143243_010 Hb_143243_010 Hb_000179_140--Hb_143243_010 Hb_132697_010 Hb_132697_010 Hb_000179_140--Hb_132697_010 Hb_002400_310 Hb_002400_310 Hb_000179_140--Hb_002400_310 Hb_006637_050 Hb_006637_050 Hb_017987_020--Hb_006637_050 Hb_017987_020--Hb_132697_010 Hb_000796_030 Hb_000796_030 Hb_017987_020--Hb_000796_030 Hb_183963_030 Hb_183963_030 Hb_017987_020--Hb_183963_030 Hb_002188_110 Hb_002188_110 Hb_017987_020--Hb_002188_110 Hb_010417_050 Hb_010417_050 Hb_017987_020--Hb_010417_050 Hb_000787_090 Hb_000787_090 Hb_002431_020--Hb_000787_090 Hb_001502_060 Hb_001502_060 Hb_002431_020--Hb_001502_060 Hb_002431_020--Hb_132697_010 Hb_001152_030 Hb_001152_030 Hb_002431_020--Hb_001152_030 Hb_002477_130 Hb_002477_130 Hb_002431_020--Hb_002477_130 Hb_002890_090 Hb_002890_090 Hb_002636_180--Hb_002890_090 Hb_000345_140 Hb_000345_140 Hb_002636_180--Hb_000345_140 Hb_000976_210 Hb_000976_210 Hb_002636_180--Hb_000976_210 Hb_000330_040 Hb_000330_040 Hb_002636_180--Hb_000330_040 Hb_001967_030 Hb_001967_030 Hb_002636_180--Hb_001967_030 Hb_000820_120 Hb_000820_120 Hb_002636_180--Hb_000820_120 Hb_000483_380 Hb_000483_380 Hb_143243_010--Hb_000483_380 Hb_002379_050 Hb_002379_050 Hb_143243_010--Hb_002379_050 Hb_003124_220 Hb_003124_220 Hb_143243_010--Hb_003124_220 Hb_143243_010--Hb_132697_010 Hb_143243_010--Hb_000787_090 Hb_132697_010--Hb_000787_090 Hb_075481_030 Hb_075481_030 Hb_132697_010--Hb_075481_030 Hb_000933_020 Hb_000933_020 Hb_132697_010--Hb_000933_020 Hb_000861_070 Hb_000861_070 Hb_132697_010--Hb_000861_070 Hb_007101_170 Hb_007101_170 Hb_002400_310--Hb_007101_170 Hb_093084_060 Hb_093084_060 Hb_002400_310--Hb_093084_060 Hb_000244_220 Hb_000244_220 Hb_002400_310--Hb_000244_220 Hb_000318_510 Hb_000318_510 Hb_002400_310--Hb_000318_510 Hb_006586_050 Hb_006586_050 Hb_002400_310--Hb_006586_050 Hb_001143_160 Hb_001143_160 Hb_002400_310--Hb_001143_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.25895 12.1261 3.3647 8.62025 17.8782 8.89552
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.47125 4.15574 11.1651 7.5426 2.34162

CAGE analysis