Hb_000181_250

Information

Type -
Description -
Location Contig181: 207108-217563
Sequence    

Annotation

kegg
ID rcu:RCOM_0591060
description catalytic, putative
nr
ID XP_012076636.1
description PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 [Jatropha curcas]
swissprot
ID B9SQI7
description Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Ricinus communis GN=RCOM_0591060 PE=3 SV=1
trembl
ID A0A061F819
description Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Theobroma cacao GN=TCM_031540 PE=3 SV=1
Gene Ontology
ID GO:0005737
description probable bifunctional methylthioribulose-1-phosphate dehydratase enolase-phosphatase e1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17521: 207140-217547
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000181_250 0.0 - - PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 [Jatropha curcas]
2 Hb_004970_160 0.0864492227 - - PREDICTED: THO complex subunit 5B-like isoform X2 [Jatropha curcas]
3 Hb_004974_010 0.0928309653 - - PREDICTED: F-box/kelch-repeat protein At3g23880-like [Prunus mume]
4 Hb_001541_080 0.0928652606 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001221_150 0.0949785413 - - AMP-activated protein kinase, gamma regulatory subunit, putative [Ricinus communis]
6 Hb_001028_070 0.0957661248 - - PREDICTED: WD repeat-containing protein 75 isoform X2 [Jatropha curcas]
7 Hb_001621_130 0.096998501 - - PREDICTED: pumilio homolog 1-like isoform X1 [Jatropha curcas]
8 Hb_000023_060 0.0994394194 - - PREDICTED: uncharacterized protein LOC105633775 [Jatropha curcas]
9 Hb_029142_010 0.0999996406 - - PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Jatropha curcas]
10 Hb_000120_610 0.1003702928 - - mitotic control protein dis3, putative [Ricinus communis]
11 Hb_002391_370 0.1010101154 - - PREDICTED: aconitate hydratase 1 [Jatropha curcas]
12 Hb_000264_100 0.1014054298 - - conserved hypothetical protein [Ricinus communis]
13 Hb_006478_060 0.1035135268 - - PREDICTED: homocysteine S-methyltransferase 2 isoform X1 [Jatropha curcas]
14 Hb_000107_040 0.1073453832 - - nuclear pore complex protein nup153, putative [Ricinus communis]
15 Hb_000342_090 0.1075852567 - - PREDICTED: serine hydroxymethyltransferase 3, chloroplastic [Jatropha curcas]
16 Hb_015763_020 0.108525571 - - PREDICTED: uncharacterized protein LOC105637166 [Jatropha curcas]
17 Hb_001675_070 0.109365742 - - eukaryotic translation elongation factor, putative [Ricinus communis]
18 Hb_000300_440 0.1100161721 - - MIF4G domain and MA3 domain-containing protein isoform 1 [Theobroma cacao]
19 Hb_002028_170 0.1102098798 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 5 [Jatropha curcas]
20 Hb_000109_100 0.1107816752 - - PREDICTED: poly [ADP-ribose] polymerase 1 [Jatropha curcas]

Gene co-expression network

sample Hb_000181_250 Hb_000181_250 Hb_004970_160 Hb_004970_160 Hb_000181_250--Hb_004970_160 Hb_004974_010 Hb_004974_010 Hb_000181_250--Hb_004974_010 Hb_001541_080 Hb_001541_080 Hb_000181_250--Hb_001541_080 Hb_001221_150 Hb_001221_150 Hb_000181_250--Hb_001221_150 Hb_001028_070 Hb_001028_070 Hb_000181_250--Hb_001028_070 Hb_001621_130 Hb_001621_130 Hb_000181_250--Hb_001621_130 Hb_000120_620 Hb_000120_620 Hb_004970_160--Hb_000120_620 Hb_004899_070 Hb_004899_070 Hb_004970_160--Hb_004899_070 Hb_005462_020 Hb_005462_020 Hb_004970_160--Hb_005462_020 Hb_004970_160--Hb_001028_070 Hb_000594_020 Hb_000594_020 Hb_004970_160--Hb_000594_020 Hb_000120_610 Hb_000120_610 Hb_004970_160--Hb_000120_610 Hb_004974_010--Hb_001621_130 Hb_006478_060 Hb_006478_060 Hb_004974_010--Hb_006478_060 Hb_010053_030 Hb_010053_030 Hb_004974_010--Hb_010053_030 Hb_000505_020 Hb_000505_020 Hb_004974_010--Hb_000505_020 Hb_001366_210 Hb_001366_210 Hb_004974_010--Hb_001366_210 Hb_001143_110 Hb_001143_110 Hb_001541_080--Hb_001143_110 Hb_000300_440 Hb_000300_440 Hb_001541_080--Hb_000300_440 Hb_003464_020 Hb_003464_020 Hb_001541_080--Hb_003464_020 Hb_000317_250 Hb_000317_250 Hb_001541_080--Hb_000317_250 Hb_001221_040 Hb_001221_040 Hb_001541_080--Hb_001221_040 Hb_001675_070 Hb_001675_070 Hb_001541_080--Hb_001675_070 Hb_067193_010 Hb_067193_010 Hb_001221_150--Hb_067193_010 Hb_001221_150--Hb_001028_070 Hb_001221_150--Hb_000120_610 Hb_004659_080 Hb_004659_080 Hb_001221_150--Hb_004659_080 Hb_001221_150--Hb_000594_020 Hb_001417_050 Hb_001417_050 Hb_001221_150--Hb_001417_050 Hb_000567_010 Hb_000567_010 Hb_001028_070--Hb_000567_010 Hb_000136_090 Hb_000136_090 Hb_001028_070--Hb_000136_090 Hb_001028_070--Hb_000120_610 Hb_001028_070--Hb_001417_050 Hb_001621_130--Hb_010053_030 Hb_000369_130 Hb_000369_130 Hb_001621_130--Hb_000369_130 Hb_001621_130--Hb_006478_060 Hb_000343_030 Hb_000343_030 Hb_001621_130--Hb_000343_030 Hb_000923_080 Hb_000923_080 Hb_001621_130--Hb_000923_080 Hb_001621_130--Hb_000505_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
72.9873 55.6365 23.1198 27.2457 86.3375 89.8565
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
30.9032 15.3402 19.0094 85.4834 23.987

CAGE analysis