Hb_000181_320

Information

Type -
Description -
Location Contig181: 275665-279144
Sequence    

Annotation

kegg
ID rcu:RCOM_0073480
description acetylglucosaminyltransferase, putative (EC:2.4.2.26)
nr
ID XP_012084967.1
description PREDICTED: xylosyltransferase 2 [Jatropha curcas]
swissprot
ID Q5QQ53
description Xylosyltransferase oxt OS=Drosophila pseudoobscura pseudoobscura GN=oxt PE=2 SV=1
trembl
ID B9T5N1
description Acetylglucosaminyltransferase, putative OS=Ricinus communis GN=RCOM_0073480 PE=4 SV=1
Gene Ontology
ID GO:0016020
description xylosyltransferase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17536: 275771-276386
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000181_320 0.0 - - PREDICTED: xylosyltransferase 2 [Jatropha curcas]
2 Hb_001266_100 0.0438573785 - - PREDICTED: uncharacterized protein LOC105649131 [Jatropha curcas]
3 Hb_003294_070 0.0674006263 - - hypothetical protein RCOM_1714550 [Ricinus communis]
4 Hb_003370_030 0.0776086227 - - PREDICTED: uncharacterized protein LOC105635547 isoform X2 [Jatropha curcas]
5 Hb_001329_160 0.0788544338 - - PREDICTED: uncharacterized protein LOC105642679 isoform X1 [Jatropha curcas]
6 Hb_000002_010 0.0790005874 - - PREDICTED: uncharacterized protein LOC105641567 [Jatropha curcas]
7 Hb_000329_710 0.0792079036 - - PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X1 [Jatropha curcas]
8 Hb_001614_060 0.0813086586 - - hypothetical protein JCGZ_06918 [Jatropha curcas]
9 Hb_000111_290 0.0823034657 - - PREDICTED: E3 ubiquitin-protein ligase KEG [Jatropha curcas]
10 Hb_003913_070 0.082342126 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 30 [Populus euphratica]
11 Hb_000538_160 0.082979903 - - PREDICTED: RNA-binding protein 5 isoform X3 [Jatropha curcas]
12 Hb_006198_120 0.0838701259 - - PREDICTED: guanine nucleotide-binding protein-like NSN1 [Jatropha curcas]
13 Hb_002391_310 0.0845945995 - - hypothetical protein PRUPE_ppa021315mg [Prunus persica]
14 Hb_167498_010 0.0851248782 - - PREDICTED: WPP domain-interacting protein 1-like [Jatropha curcas]
15 Hb_000025_410 0.086040046 - - PREDICTED: pentatricopeptide repeat-containing protein At5g01110-like [Populus euphratica]
16 Hb_001114_140 0.0864720174 - - PREDICTED: uncharacterized protein LOC105631631 [Jatropha curcas]
17 Hb_001004_060 0.0871040031 - - PREDICTED: uncharacterized protein LOC105630220 isoform X4 [Jatropha curcas]
18 Hb_003529_170 0.087985502 - - PREDICTED: ATP-dependent RNA helicase DHX29 [Jatropha curcas]
19 Hb_000792_010 0.0883410063 - - PREDICTED: mRNA-capping enzyme [Jatropha curcas]
20 Hb_000590_050 0.0885907109 - - PREDICTED: protein-tyrosine-phosphatase MKP1 [Jatropha curcas]

Gene co-expression network

sample Hb_000181_320 Hb_000181_320 Hb_001266_100 Hb_001266_100 Hb_000181_320--Hb_001266_100 Hb_003294_070 Hb_003294_070 Hb_000181_320--Hb_003294_070 Hb_003370_030 Hb_003370_030 Hb_000181_320--Hb_003370_030 Hb_001329_160 Hb_001329_160 Hb_000181_320--Hb_001329_160 Hb_000002_010 Hb_000002_010 Hb_000181_320--Hb_000002_010 Hb_000329_710 Hb_000329_710 Hb_000181_320--Hb_000329_710 Hb_001266_100--Hb_003370_030 Hb_001614_060 Hb_001614_060 Hb_001266_100--Hb_001614_060 Hb_001114_140 Hb_001114_140 Hb_001266_100--Hb_001114_140 Hb_001266_100--Hb_001329_160 Hb_000003_190 Hb_000003_190 Hb_001266_100--Hb_000003_190 Hb_000181_400 Hb_000181_400 Hb_003294_070--Hb_000181_400 Hb_009079_030 Hb_009079_030 Hb_003294_070--Hb_009079_030 Hb_004324_130 Hb_004324_130 Hb_003294_070--Hb_004324_130 Hb_165928_030 Hb_165928_030 Hb_003294_070--Hb_165928_030 Hb_000003_320 Hb_000003_320 Hb_003294_070--Hb_000003_320 Hb_007163_120 Hb_007163_120 Hb_003370_030--Hb_007163_120 Hb_003370_030--Hb_001114_140 Hb_005000_260 Hb_005000_260 Hb_003370_030--Hb_005000_260 Hb_033772_030 Hb_033772_030 Hb_003370_030--Hb_033772_030 Hb_003464_090 Hb_003464_090 Hb_003370_030--Hb_003464_090 Hb_001838_060 Hb_001838_060 Hb_001329_160--Hb_001838_060 Hb_000976_310 Hb_000976_310 Hb_001329_160--Hb_000976_310 Hb_008959_020 Hb_008959_020 Hb_001329_160--Hb_008959_020 Hb_001080_230 Hb_001080_230 Hb_001329_160--Hb_001080_230 Hb_000395_130 Hb_000395_130 Hb_001329_160--Hb_000395_130 Hb_001546_080 Hb_001546_080 Hb_001329_160--Hb_001546_080 Hb_010174_110 Hb_010174_110 Hb_000002_010--Hb_010174_110 Hb_001341_170 Hb_001341_170 Hb_000002_010--Hb_001341_170 Hb_000107_490 Hb_000107_490 Hb_000002_010--Hb_000107_490 Hb_000556_160 Hb_000556_160 Hb_000002_010--Hb_000556_160 Hb_000111_290 Hb_000111_290 Hb_000002_010--Hb_000111_290 Hb_003253_040 Hb_003253_040 Hb_000002_010--Hb_003253_040 Hb_000792_010 Hb_000792_010 Hb_000329_710--Hb_000792_010 Hb_011386_010 Hb_011386_010 Hb_000329_710--Hb_011386_010 Hb_001004_060 Hb_001004_060 Hb_000329_710--Hb_001004_060 Hb_002518_260 Hb_002518_260 Hb_000329_710--Hb_002518_260 Hb_009486_140 Hb_009486_140 Hb_000329_710--Hb_009486_140 Hb_000041_110 Hb_000041_110 Hb_000329_710--Hb_000041_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.04901 8.92529 3.07131 5.40827 5.23783 8.08331
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.16276 7.5212 5.91245 9.63308 7.59891

CAGE analysis