Hb_000181_450

Information

Type -
Description -
Location Contig181: 387845-390919
Sequence    

Annotation

kegg
ID rcu:RCOM_1522470
description Leucine-rich repeat receptor protein kinase EXS precursor, putative (EC:1.3.1.74)
nr
ID KDP27049.1
description hypothetical protein JCGZ_20984 [Jatropha curcas]
swissprot
ID C0LGS2
description Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=2 SV=1
trembl
ID A0A067K5F8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20984 PE=4 SV=1
Gene Ontology
ID GO:0005515
description lrr receptor-like serine threonine-protein kinase fls2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000181_450 0.0 - - hypothetical protein JCGZ_20984 [Jatropha curcas]
2 Hb_002461_080 0.1119222587 - - PREDICTED: probable pectinesterase 53 [Jatropha curcas]
3 Hb_160459_030 0.1329906784 - - PREDICTED: uncharacterized protein LOC105648122 [Jatropha curcas]
4 Hb_001934_010 0.1454847131 - - o-methyltransferase, putative [Ricinus communis]
5 Hb_000221_070 0.1584352633 - - conserved hypothetical protein [Ricinus communis]
6 Hb_008554_010 0.1773116169 - - -
7 Hb_002984_030 0.1774646585 - - -
8 Hb_003216_020 0.1946000769 transcription factor TF Family: Orphans PREDICTED: histidine kinase 2 [Jatropha curcas]
9 Hb_001277_420 0.1987479243 - - PREDICTED: protein lin-12-like isoform X2 [Populus euphratica]
10 Hb_106728_020 0.1987636584 - - cytochrome P450, putative [Ricinus communis]
11 Hb_004590_010 0.2022399146 - - hypothetical protein JCGZ_17178 [Jatropha curcas]
12 Hb_007403_010 0.2024862553 - - hypothetical protein JCGZ_11090 [Jatropha curcas]
13 Hb_179118_010 0.2063018212 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
14 Hb_073096_010 0.2091924525 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 45-like [Jatropha curcas]
15 Hb_007313_050 0.2110192558 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
16 Hb_004195_030 0.2110200524 - - hypothetical protein POPTR_0006s17880g, partial [Populus trichocarpa]
17 Hb_006550_010 0.2113860219 - - PREDICTED: vacuolar amino acid transporter 1 [Eucalyptus grandis]
18 Hb_001131_070 0.2121781647 - - PREDICTED: uncharacterized protein LOC105638217 [Jatropha curcas]
19 Hb_002894_040 0.2128770334 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001660_010 0.2136453648 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000181_450 Hb_000181_450 Hb_002461_080 Hb_002461_080 Hb_000181_450--Hb_002461_080 Hb_160459_030 Hb_160459_030 Hb_000181_450--Hb_160459_030 Hb_001934_010 Hb_001934_010 Hb_000181_450--Hb_001934_010 Hb_000221_070 Hb_000221_070 Hb_000181_450--Hb_000221_070 Hb_008554_010 Hb_008554_010 Hb_000181_450--Hb_008554_010 Hb_002984_030 Hb_002984_030 Hb_000181_450--Hb_002984_030 Hb_002461_080--Hb_008554_010 Hb_011861_110 Hb_011861_110 Hb_002461_080--Hb_011861_110 Hb_001373_080 Hb_001373_080 Hb_002461_080--Hb_001373_080 Hb_001131_070 Hb_001131_070 Hb_002461_080--Hb_001131_070 Hb_073096_010 Hb_073096_010 Hb_002461_080--Hb_073096_010 Hb_004195_030 Hb_004195_030 Hb_160459_030--Hb_004195_030 Hb_007313_050 Hb_007313_050 Hb_160459_030--Hb_007313_050 Hb_021443_020 Hb_021443_020 Hb_160459_030--Hb_021443_020 Hb_160459_030--Hb_001934_010 Hb_001059_050 Hb_001059_050 Hb_160459_030--Hb_001059_050 Hb_001610_050 Hb_001610_050 Hb_001934_010--Hb_001610_050 Hb_001277_420 Hb_001277_420 Hb_001934_010--Hb_001277_420 Hb_001016_040 Hb_001016_040 Hb_001934_010--Hb_001016_040 Hb_183209_020 Hb_183209_020 Hb_001934_010--Hb_183209_020 Hb_000221_070--Hb_160459_030 Hb_000221_070--Hb_002984_030 Hb_006550_010 Hb_006550_010 Hb_000221_070--Hb_006550_010 Hb_000221_070--Hb_001934_010 Hb_000221_070--Hb_001277_420 Hb_008554_010--Hb_001373_080 Hb_008554_010--Hb_004195_030 Hb_008554_010--Hb_001131_070 Hb_000431_180 Hb_000431_180 Hb_008554_010--Hb_000431_180 Hb_000331_690 Hb_000331_690 Hb_008554_010--Hb_000331_690 Hb_002984_030--Hb_001934_010 Hb_002984_030--Hb_160459_030 Hb_003216_020 Hb_003216_020 Hb_002984_030--Hb_003216_020 Hb_008643_020 Hb_008643_020 Hb_002984_030--Hb_008643_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.156078 0.0284181 0.171818 0 0.0326772
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0794194 0

CAGE analysis