Hb_000183_060

Information

Type -
Description -
Location Contig183: 94377-95567
Sequence    

Annotation

kegg
ID gmx:102660201
description uncharacterized LOC102660201
nr
ID XP_012089877.1
description PREDICTED: uncharacterized protein LOC105648176 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID B9T188
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0495440 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000183_060 0.0 - - PREDICTED: uncharacterized protein LOC105648176 [Jatropha curcas]
2 Hb_059580_010 0.2568534096 - - PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Jatropha curcas]
3 Hb_017647_020 0.2587887935 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
4 Hb_005940_040 0.2906388592 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
5 Hb_003095_050 0.3097957787 - - PREDICTED: transmembrane protein 45B [Jatropha curcas]
6 Hb_018609_010 0.3134186739 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001277_150 0.3137975989 - - hypothetical protein VITISV_043492 [Vitis vinifera]
8 Hb_005725_190 0.3186017367 - - hypothetical protein JCGZ_15992 [Jatropha curcas]
9 Hb_000004_150 0.3203198012 - - hypothetical protein RCOM_1382630 [Ricinus communis]
10 Hb_000007_170 0.3203198012 - - PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein [Nelumbo nucifera]
11 Hb_000010_280 0.3203198012 - - hypothetical protein JCGZ_13805 [Jatropha curcas]
12 Hb_000022_220 0.3203198012 - - PREDICTED: potassium channel KAT3 [Jatropha curcas]
13 Hb_000045_120 0.3203198012 - - hypothetical protein JCGZ_01307 [Jatropha curcas]
14 Hb_000056_320 0.3203198012 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
15 Hb_000066_110 0.3203198012 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01370 [Jatropha curcas]
16 Hb_000072_270 0.3203198012 - - JHL22C18.10 [Jatropha curcas]
17 Hb_000078_110 0.3203198012 - - PREDICTED: uncharacterized protein LOC105640496 [Jatropha curcas]
18 Hb_000081_190 0.3203198012 - - -
19 Hb_000082_030 0.3203198012 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105164525 [Sesamum indicum]
20 Hb_000085_430 0.3203198012 - - -

Gene co-expression network

sample Hb_000183_060 Hb_000183_060 Hb_059580_010 Hb_059580_010 Hb_000183_060--Hb_059580_010 Hb_017647_020 Hb_017647_020 Hb_000183_060--Hb_017647_020 Hb_005940_040 Hb_005940_040 Hb_000183_060--Hb_005940_040 Hb_003095_050 Hb_003095_050 Hb_000183_060--Hb_003095_050 Hb_018609_010 Hb_018609_010 Hb_000183_060--Hb_018609_010 Hb_001277_150 Hb_001277_150 Hb_000183_060--Hb_001277_150 Hb_059580_010--Hb_001277_150 Hb_059580_010--Hb_005940_040 Hb_000215_120 Hb_000215_120 Hb_059580_010--Hb_000215_120 Hb_002760_060 Hb_002760_060 Hb_059580_010--Hb_002760_060 Hb_001985_010 Hb_001985_010 Hb_059580_010--Hb_001985_010 Hb_059580_010--Hb_018609_010 Hb_017647_020--Hb_001985_010 Hb_000004_150 Hb_000004_150 Hb_017647_020--Hb_000004_150 Hb_000007_170 Hb_000007_170 Hb_017647_020--Hb_000007_170 Hb_000010_280 Hb_000010_280 Hb_017647_020--Hb_000010_280 Hb_000022_220 Hb_000022_220 Hb_017647_020--Hb_000022_220 Hb_000045_120 Hb_000045_120 Hb_017647_020--Hb_000045_120 Hb_005940_040--Hb_000215_120 Hb_000016_290 Hb_000016_290 Hb_005940_040--Hb_000016_290 Hb_005940_040--Hb_018609_010 Hb_004059_010 Hb_004059_010 Hb_005940_040--Hb_004059_010 Hb_001796_010 Hb_001796_010 Hb_005940_040--Hb_001796_010 Hb_003053_060 Hb_003053_060 Hb_003095_050--Hb_003053_060 Hb_015978_030 Hb_015978_030 Hb_003095_050--Hb_015978_030 Hb_000142_010 Hb_000142_010 Hb_003095_050--Hb_000142_010 Hb_003095_050--Hb_059580_010 Hb_000275_070 Hb_000275_070 Hb_003095_050--Hb_000275_070 Hb_075449_030 Hb_075449_030 Hb_003095_050--Hb_075449_030 Hb_018609_010--Hb_001796_010 Hb_186671_020 Hb_186671_020 Hb_018609_010--Hb_186671_020 Hb_005050_010 Hb_005050_010 Hb_018609_010--Hb_005050_010 Hb_099085_010 Hb_099085_010 Hb_018609_010--Hb_099085_010 Hb_000979_270 Hb_000979_270 Hb_018609_010--Hb_000979_270 Hb_064583_010 Hb_064583_010 Hb_018609_010--Hb_064583_010 Hb_033153_010 Hb_033153_010 Hb_001277_150--Hb_033153_010 Hb_001277_150--Hb_000215_120 Hb_001277_150--Hb_001985_010 Hb_005648_030 Hb_005648_030 Hb_001277_150--Hb_005648_030 Hb_001277_150--Hb_002760_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.663049 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0557428 0.100481 0 0

CAGE analysis