Hb_000184_100

Information

Type -
Description -
Location Contig184: 106630-108362
Sequence    

Annotation

kegg
ID tcc:TCM_011048
description hypothetical protein
nr
ID ABK51384.1
description IMP dehydrogenase/GMP reductase [Hevea brasiliensis]
swissprot
ID -
description -
trembl
ID A0MZQ2
description IMP dehydrogenase/GMP reductase (Fragment) OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000184_100 0.0 - - IMP dehydrogenase/GMP reductase [Hevea brasiliensis]
2 Hb_023711_010 0.1439415974 - - -
3 Hb_001789_130 0.1440362959 - - short-chain dehydrogenase Tic32 family protein [Populus trichocarpa]
4 Hb_004800_120 0.1441620025 - - PREDICTED: maf-like protein DDB_G0281937 isoform X1 [Jatropha curcas]
5 Hb_004976_070 0.1543081016 - - eukaryotic translation initiation factor 2b, epsilon subunit, putative [Ricinus communis]
6 Hb_000347_330 0.1655601826 - - hypothetical protein AMTR_s00420p00013340 [Amborella trichopoda]
7 Hb_007290_080 0.1683310634 - - hypothetical protein CISIN_1g047098mg [Citrus sinensis]
8 Hb_087749_010 0.1692145731 - - PREDICTED: uncharacterized protein LOC105631194 isoform X1 [Jatropha curcas]
9 Hb_086639_090 0.1700264571 - - 60S ribosomal protein L7a, putative [Ricinus communis]
10 Hb_000175_320 0.1704243458 - - PREDICTED: formin-like protein 14 [Jatropha curcas]
11 Hb_005667_040 0.1714628182 - - PREDICTED: trafficking protein particle complex subunit 5 [Jatropha curcas]
12 Hb_004709_010 0.1722691234 - - hypothetical protein B456_007G097300 [Gossypium raimondii]
13 Hb_002805_220 0.17245587 - - PREDICTED: 60S ribosomal protein L2, mitochondrial [Jatropha curcas]
14 Hb_001454_260 0.1745450598 - - hypothetical protein RCOM_0681280 [Ricinus communis]
15 Hb_002016_120 0.174545975 - - PREDICTED: uncharacterized protein OsI_027940 [Jatropha curcas]
16 Hb_005400_030 0.1746800265 - - PREDICTED: LYR motif-containing protein At3g19508 [Jatropha curcas]
17 Hb_000167_060 0.1747112745 - - PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Jatropha curcas]
18 Hb_003581_100 0.1755311677 - - PREDICTED: protein TWIN LOV 1 isoform X1 [Jatropha curcas]
19 Hb_140543_010 0.1768361139 - - -
20 Hb_002798_020 0.1797713826 - - PREDICTED: uncharacterized protein LOC105647735 [Jatropha curcas]

Gene co-expression network

sample Hb_000184_100 Hb_000184_100 Hb_023711_010 Hb_023711_010 Hb_000184_100--Hb_023711_010 Hb_001789_130 Hb_001789_130 Hb_000184_100--Hb_001789_130 Hb_004800_120 Hb_004800_120 Hb_000184_100--Hb_004800_120 Hb_004976_070 Hb_004976_070 Hb_000184_100--Hb_004976_070 Hb_000347_330 Hb_000347_330 Hb_000184_100--Hb_000347_330 Hb_007290_080 Hb_007290_080 Hb_000184_100--Hb_007290_080 Hb_000175_320 Hb_000175_320 Hb_023711_010--Hb_000175_320 Hb_000753_190 Hb_000753_190 Hb_023711_010--Hb_000753_190 Hb_001301_050 Hb_001301_050 Hb_023711_010--Hb_001301_050 Hb_086639_090 Hb_086639_090 Hb_023711_010--Hb_086639_090 Hb_000599_280 Hb_000599_280 Hb_023711_010--Hb_000599_280 Hb_001789_130--Hb_004800_120 Hb_000003_730 Hb_000003_730 Hb_001789_130--Hb_000003_730 Hb_004502_020 Hb_004502_020 Hb_001789_130--Hb_004502_020 Hb_000152_550 Hb_000152_550 Hb_001789_130--Hb_000152_550 Hb_002016_120 Hb_002016_120 Hb_001789_130--Hb_002016_120 Hb_001117_090 Hb_001117_090 Hb_001789_130--Hb_001117_090 Hb_004800_120--Hb_002016_120 Hb_004800_120--Hb_001117_090 Hb_005357_130 Hb_005357_130 Hb_004800_120--Hb_005357_130 Hb_000086_550 Hb_000086_550 Hb_004800_120--Hb_000086_550 Hb_006816_210 Hb_006816_210 Hb_004800_120--Hb_006816_210 Hb_004871_040 Hb_004871_040 Hb_004800_120--Hb_004871_040 Hb_002805_220 Hb_002805_220 Hb_004976_070--Hb_002805_220 Hb_000676_140 Hb_000676_140 Hb_004976_070--Hb_000676_140 Hb_002170_040 Hb_002170_040 Hb_004976_070--Hb_002170_040 Hb_000847_060 Hb_000847_060 Hb_004976_070--Hb_000847_060 Hb_000167_060 Hb_000167_060 Hb_004976_070--Hb_000167_060 Hb_000028_100 Hb_000028_100 Hb_004976_070--Hb_000028_100 Hb_000258_140 Hb_000258_140 Hb_000347_330--Hb_000258_140 Hb_000212_290 Hb_000212_290 Hb_000347_330--Hb_000212_290 Hb_024758_010 Hb_024758_010 Hb_000347_330--Hb_024758_010 Hb_001284_030 Hb_001284_030 Hb_000347_330--Hb_001284_030 Hb_000347_330--Hb_023711_010 Hb_001571_090 Hb_001571_090 Hb_007290_080--Hb_001571_090 Hb_010815_030 Hb_010815_030 Hb_007290_080--Hb_010815_030 Hb_000329_020 Hb_000329_020 Hb_007290_080--Hb_000329_020 Hb_009384_020 Hb_009384_020 Hb_007290_080--Hb_009384_020 Hb_148909_020 Hb_148909_020 Hb_007290_080--Hb_148909_020 Hb_009711_020 Hb_009711_020 Hb_007290_080--Hb_009711_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.970818 2.31857 1.92992 3.49579 2.41431 8.43195
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.10587 14.4994 2.02061 2.48807 5.15371

CAGE analysis