Hb_000185_050

Information

Type -
Description -
Location Contig185: 62134-67716
Sequence    

Annotation

kegg
ID rcu:RCOM_1509490
description FKBP12-interacting protein of 37 kDa, putative
nr
ID XP_012080007.1
description PREDICTED: FKBP12-interacting protein of 37 kDa [Jatropha curcas]
swissprot
ID Q9ZSZ8
description FKBP12-interacting protein of 37 kDa OS=Arabidopsis thaliana GN=FIP37 PE=1 SV=1
trembl
ID A0A067K4A6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11432 PE=4 SV=1
Gene Ontology
ID GO:0005634
description fkbp12-interacting protein of 37 kda

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18103: 62193-66077 , PASA_asmbl_18104: 66112-67690
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000185_050 0.0 - - PREDICTED: FKBP12-interacting protein of 37 kDa [Jatropha curcas]
2 Hb_001472_100 0.0886349967 - - ubiquitin-conjugating enzyme h, putative [Ricinus communis]
3 Hb_002946_190 0.0894201576 - - PREDICTED: nudix hydrolase 26, chloroplastic [Jatropha curcas]
4 Hb_000731_160 0.0912391229 - - PREDICTED: adenosine deaminase-like protein [Jatropha curcas]
5 Hb_111036_010 0.0919867555 - - Eukaryotic translation initiation factor 6-2 [Glycine soja]
6 Hb_000690_190 0.0919969562 - - 40S ribosomal protein S7, putative [Ricinus communis]
7 Hb_003942_020 0.0921246785 - - PREDICTED: multiple RNA-binding domain-containing protein 1 isoform X1 [Jatropha curcas]
8 Hb_000270_470 0.0933419165 transcription factor TF Family: E2F-DP PREDICTED: pentatricopeptide repeat-containing protein At1g74900, mitochondrial [Jatropha curcas]
9 Hb_000012_250 0.0938159061 - - hypothetical protein L484_019524 [Morus notabilis]
10 Hb_002811_170 0.0953511214 - - PREDICTED: 40S ribosomal protein S3a-1 [Jatropha curcas]
11 Hb_000946_090 0.0981314428 - - PREDICTED: cyclin-C1-2-like isoform X2 [Jatropha curcas]
12 Hb_001105_170 0.0984333126 - - PREDICTED: uncharacterized protein LOC105642727 isoform X1 [Jatropha curcas]
13 Hb_003064_020 0.0985158938 - - hypothetical protein JCGZ_21649 [Jatropha curcas]
14 Hb_004041_020 0.0990049892 - - ATP synthase D chain, mitochondrial, putative [Ricinus communis]
15 Hb_002307_180 0.1009249402 - - PREDICTED: rRNA-processing protein EFG1 isoform X2 [Jatropha curcas]
16 Hb_008554_060 0.1012209985 - - PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Jatropha curcas]
17 Hb_001712_070 0.1012805901 - - PREDICTED: HD domain-containing protein 2 [Jatropha curcas]
18 Hb_001804_080 0.1015478628 - - PREDICTED: aldo-keto reductase family 4 member C9-like [Jatropha curcas]
19 Hb_000599_260 0.1033072875 - - Vacuolar protein sorting-associated protein 2 like 3 [Glycine soja]
20 Hb_000318_210 0.104534088 - - PREDICTED: 40S ribosomal protein S12-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000185_050 Hb_000185_050 Hb_001472_100 Hb_001472_100 Hb_000185_050--Hb_001472_100 Hb_002946_190 Hb_002946_190 Hb_000185_050--Hb_002946_190 Hb_000731_160 Hb_000731_160 Hb_000185_050--Hb_000731_160 Hb_111036_010 Hb_111036_010 Hb_000185_050--Hb_111036_010 Hb_000690_190 Hb_000690_190 Hb_000185_050--Hb_000690_190 Hb_003942_020 Hb_003942_020 Hb_000185_050--Hb_003942_020 Hb_000976_120 Hb_000976_120 Hb_001472_100--Hb_000976_120 Hb_002553_060 Hb_002553_060 Hb_001472_100--Hb_002553_060 Hb_000110_310 Hb_000110_310 Hb_001472_100--Hb_000110_310 Hb_107879_010 Hb_107879_010 Hb_001472_100--Hb_107879_010 Hb_000270_680 Hb_000270_680 Hb_001472_100--Hb_000270_680 Hb_003207_180 Hb_003207_180 Hb_001472_100--Hb_003207_180 Hb_004041_020 Hb_004041_020 Hb_002946_190--Hb_004041_020 Hb_002946_190--Hb_000690_190 Hb_001863_380 Hb_001863_380 Hb_002946_190--Hb_001863_380 Hb_146673_010 Hb_146673_010 Hb_002946_190--Hb_146673_010 Hb_000413_240 Hb_000413_240 Hb_002946_190--Hb_000413_240 Hb_002946_190--Hb_001472_100 Hb_000012_250 Hb_000012_250 Hb_000731_160--Hb_000012_250 Hb_002477_300 Hb_002477_300 Hb_000731_160--Hb_002477_300 Hb_000731_160--Hb_146673_010 Hb_000731_160--Hb_001472_100 Hb_006570_140 Hb_006570_140 Hb_000731_160--Hb_006570_140 Hb_000270_470 Hb_000270_470 Hb_111036_010--Hb_000270_470 Hb_002439_010 Hb_002439_010 Hb_111036_010--Hb_002439_010 Hb_000875_080 Hb_000875_080 Hb_111036_010--Hb_000875_080 Hb_111036_010--Hb_003942_020 Hb_003678_020 Hb_003678_020 Hb_111036_010--Hb_003678_020 Hb_002271_010 Hb_002271_010 Hb_111036_010--Hb_002271_010 Hb_002307_180 Hb_002307_180 Hb_000690_190--Hb_002307_180 Hb_000599_260 Hb_000599_260 Hb_000690_190--Hb_000599_260 Hb_007878_010 Hb_007878_010 Hb_000690_190--Hb_007878_010 Hb_161574_020 Hb_161574_020 Hb_000690_190--Hb_161574_020 Hb_002171_060 Hb_002171_060 Hb_000690_190--Hb_002171_060 Hb_007163_070 Hb_007163_070 Hb_003942_020--Hb_007163_070 Hb_008554_060 Hb_008554_060 Hb_003942_020--Hb_008554_060 Hb_011512_070 Hb_011512_070 Hb_003942_020--Hb_011512_070 Hb_189216_020 Hb_189216_020 Hb_003942_020--Hb_189216_020 Hb_000529_030 Hb_000529_030 Hb_003942_020--Hb_000529_030 Hb_003942_020--Hb_146673_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.61446 2.57301 10.6175 5.66662 5.09604 4.48309
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.06054 13.037 3.25552 6.31535 4.96286

CAGE analysis