Hb_000185_080

Information

Type -
Description -
Location Contig185: 108087-111922
Sequence    

Annotation

kegg
ID rcu:RCOM_1509620
description receptor protein kinase, putative (EC:2.7.11.30 1.3.1.74)
nr
ID XP_012080011.1
description PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g26540 [Jatropha curcas]
swissprot
ID C0LGR3
description Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=2 SV=1
trembl
ID A0A067KGT9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11435 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable lrr receptor-like serine threonine-protein kinase at4g26540

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18106: 107777-111934
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000185_080 0.0 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g26540 [Jatropha curcas]
2 Hb_004738_110 0.1855764954 - - phosphoenolpyruvate carboxylase [Manihot esculenta]
3 Hb_001675_190 0.1944658008 - - PREDICTED: probable plastidic glucose transporter 3 [Jatropha curcas]
4 Hb_000613_010 0.2003401486 - - PREDICTED: uncharacterized protein LOC105647991 [Jatropha curcas]
5 Hb_000365_100 0.2020531724 - - PREDICTED: probable galacturonosyltransferase 7 isoform X1 [Jatropha curcas]
6 Hb_004542_020 0.2074640846 - - hypothetical chloroplast RF1 [Hevea brasiliensis]
7 Hb_000136_140 0.2141019796 - - PREDICTED: uncharacterized protein LOC105648960 [Jatropha curcas]
8 Hb_000207_190 0.2144430894 - - PREDICTED: uncharacterized protein LOC105632052 [Jatropha curcas]
9 Hb_000333_080 0.2193871263 - - PREDICTED: uncharacterized protein LOC105637962 isoform X1 [Jatropha curcas]
10 Hb_000984_270 0.2216405442 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000260_590 0.2223753277 - - electron transporter, putative [Ricinus communis]
12 Hb_000609_100 0.224723594 - - Thylakoid lumenal 16.5 kDa protein, chloroplast precursor, putative [Ricinus communis]
13 Hb_021495_020 0.2260820492 - - chitinase, putative [Ricinus communis]
14 Hb_002053_110 0.2267059117 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
15 Hb_004223_190 0.2296362291 - - PREDICTED: filament-like plant protein 4 [Jatropha curcas]
16 Hb_003430_090 0.2300178261 - - ATP binding protein, putative [Ricinus communis]
17 Hb_002750_050 0.2304534883 - - Chromosome-associated kinesin KLP1, putative [Ricinus communis]
18 Hb_002078_160 0.2304862756 - - PREDICTED: probable arabinosyltransferase ARAD1 [Jatropha curcas]
19 Hb_041290_010 0.2335652997 - - thioredoxin family protein [Populus trichocarpa]
20 Hb_002079_030 0.2363185031 - - PREDICTED: uncharacterized protein At1g32220, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000185_080 Hb_000185_080 Hb_004738_110 Hb_004738_110 Hb_000185_080--Hb_004738_110 Hb_001675_190 Hb_001675_190 Hb_000185_080--Hb_001675_190 Hb_000613_010 Hb_000613_010 Hb_000185_080--Hb_000613_010 Hb_000365_100 Hb_000365_100 Hb_000185_080--Hb_000365_100 Hb_004542_020 Hb_004542_020 Hb_000185_080--Hb_004542_020 Hb_000136_140 Hb_000136_140 Hb_000185_080--Hb_000136_140 Hb_143629_060 Hb_143629_060 Hb_004738_110--Hb_143629_060 Hb_005288_110 Hb_005288_110 Hb_004738_110--Hb_005288_110 Hb_006052_030 Hb_006052_030 Hb_004738_110--Hb_006052_030 Hb_048141_030 Hb_048141_030 Hb_004738_110--Hb_048141_030 Hb_003058_020 Hb_003058_020 Hb_004738_110--Hb_003058_020 Hb_002053_110 Hb_002053_110 Hb_004738_110--Hb_002053_110 Hb_001491_030 Hb_001491_030 Hb_001675_190--Hb_001491_030 Hb_011926_040 Hb_011926_040 Hb_001675_190--Hb_011926_040 Hb_000058_110 Hb_000058_110 Hb_001675_190--Hb_000058_110 Hb_000056_130 Hb_000056_130 Hb_001675_190--Hb_000056_130 Hb_000200_350 Hb_000200_350 Hb_001675_190--Hb_000200_350 Hb_006810_030 Hb_006810_030 Hb_001675_190--Hb_006810_030 Hb_000984_270 Hb_000984_270 Hb_000613_010--Hb_000984_270 Hb_000172_350 Hb_000172_350 Hb_000613_010--Hb_000172_350 Hb_000613_010--Hb_000136_140 Hb_011486_040 Hb_011486_040 Hb_000613_010--Hb_011486_040 Hb_001981_040 Hb_001981_040 Hb_000613_010--Hb_001981_040 Hb_009020_040 Hb_009020_040 Hb_000613_010--Hb_009020_040 Hb_000365_100--Hb_000136_140 Hb_000347_040 Hb_000347_040 Hb_000365_100--Hb_000347_040 Hb_001604_120 Hb_001604_120 Hb_000365_100--Hb_001604_120 Hb_000188_050 Hb_000188_050 Hb_000365_100--Hb_000188_050 Hb_013726_080 Hb_013726_080 Hb_000365_100--Hb_013726_080 Hb_002498_140 Hb_002498_140 Hb_000365_100--Hb_002498_140 Hb_015531_030 Hb_015531_030 Hb_004542_020--Hb_015531_030 Hb_004542_020--Hb_143629_060 Hb_001959_240 Hb_001959_240 Hb_004542_020--Hb_001959_240 Hb_004542_020--Hb_004738_110 Hb_000260_590 Hb_000260_590 Hb_004542_020--Hb_000260_590 Hb_005271_160 Hb_005271_160 Hb_004542_020--Hb_005271_160 Hb_001512_040 Hb_001512_040 Hb_000136_140--Hb_001512_040 Hb_000244_180 Hb_000244_180 Hb_000136_140--Hb_000244_180 Hb_012573_050 Hb_012573_050 Hb_000136_140--Hb_012573_050 Hb_000836_290 Hb_000836_290 Hb_000136_140--Hb_000836_290 Hb_000136_140--Hb_006810_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.56874 0.27388 9.31479 11.4065 10.4882 11.8683
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.55942 1.85505 5.80214 0.327962 16.203

CAGE analysis