Hb_000185_150

Information

Type -
Description -
Location Contig185: 183029-184321
Sequence    

Annotation

kegg
ID rcu:RCOM_1509790
description Heme-binding protein, putative
nr
ID XP_002511361.1
description Heme-binding protein, putative [Ricinus communis]
swissprot
ID Q9Y5Z4
description Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE=1 SV=1
trembl
ID B9RAY6
description Heme-binding protein, putative OS=Ricinus communis GN=RCOM_1509790 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18122: 183031-184337
cDNA
(Sanger)
(ID:Location)		 003_B17.ab1: 183036-184214 , 003_P03.ab1: 183050-184212 , 006_H18.ab1: 183050-184147 , 008_L17.ab1: 183054-184024 , 009_I09.ab1: 183054-184194 , 012_B15.ab1: 183050-184094 , 013_D04.ab1: 183054-184173 , 016_L05.ab1: 183054-184143 , 020_N11.ab1: 183054-184196 , 022_M21.ab1: 183054-184019 , 027_I23.ab1: 183034-184156 , 031_M02.ab1: 183054-184223 , 040_L22.ab1: 183036-184175 , 040_M02.ab1: 183031-184235 , 047_F13.ab1: 183054-184174 , 048_F20.ab1: 183054-184255 , 050_O22.ab1: 183034-183994

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000185_150 0.0 - - Heme-binding protein, putative [Ricinus communis]
2 Hb_000086_050 0.0968351085 - - PREDICTED: structural maintenance of chromosomes protein 1 [Jatropha curcas]
3 Hb_000024_120 0.0980413617 - - PREDICTED: uncharacterized protein LOC105122546 isoform X1 [Populus euphratica]
4 Hb_003638_010 0.1050245534 transcription factor TF Family: ARID PREDICTED: lysine-specific demethylase 5B isoform X2 [Jatropha curcas]
5 Hb_000988_030 0.1092770702 - - conserved hypothetical protein [Ricinus communis]
6 Hb_009449_090 0.1132731773 - - PREDICTED: RNA-binding protein 25 isoform X1 [Jatropha curcas]
7 Hb_005054_190 0.115520299 - - PREDICTED: uncharacterized protein LOC105646630 isoform X1 [Jatropha curcas]
8 Hb_000345_490 0.1164832133 - - PREDICTED: mitochondrial Rho GTPase 1-like [Jatropha curcas]
9 Hb_001231_030 0.1198403294 - - PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Jatropha curcas]
10 Hb_001454_220 0.1227153945 - - PREDICTED: ubiquitin-like-specific protease ESD4 [Jatropha curcas]
11 Hb_002902_020 0.1264806911 - - PREDICTED: uncharacterized protein LOC105639827 [Jatropha curcas]
12 Hb_007576_220 0.1302773121 - - PREDICTED: kanadaptin [Jatropha curcas]
13 Hb_003430_030 0.1314404608 - - PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 [Jatropha curcas]
14 Hb_000116_510 0.1336201505 - - PREDICTED: RNA-binding protein 24-A-like isoform X2 [Jatropha curcas]
15 Hb_000732_070 0.1347479988 - - PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
16 Hb_005539_040 0.1361907362 - - PREDICTED: RNA-binding protein 25 isoform X3 [Jatropha curcas]
17 Hb_002073_280 0.138983721 - - PREDICTED: phospholipid-transporting ATPase 3 isoform X1 [Jatropha curcas]
18 Hb_007818_040 0.139673848 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 50 isoform X2 [Jatropha curcas]
19 Hb_000122_220 0.1399871622 - - Prenylated Rab acceptor protein, putative [Ricinus communis]
20 Hb_007576_230 0.1410276477 - - hypothetical protein JCGZ_25616 [Jatropha curcas]

Gene co-expression network

sample Hb_000185_150 Hb_000185_150 Hb_000086_050 Hb_000086_050 Hb_000185_150--Hb_000086_050 Hb_000024_120 Hb_000024_120 Hb_000185_150--Hb_000024_120 Hb_003638_010 Hb_003638_010 Hb_000185_150--Hb_003638_010 Hb_000988_030 Hb_000988_030 Hb_000185_150--Hb_000988_030 Hb_009449_090 Hb_009449_090 Hb_000185_150--Hb_009449_090 Hb_005054_190 Hb_005054_190 Hb_000185_150--Hb_005054_190 Hb_000086_050--Hb_009449_090 Hb_007283_030 Hb_007283_030 Hb_000086_050--Hb_007283_030 Hb_007576_220 Hb_007576_220 Hb_000086_050--Hb_007576_220 Hb_002687_090 Hb_002687_090 Hb_000086_050--Hb_002687_090 Hb_007576_230 Hb_007576_230 Hb_000086_050--Hb_007576_230 Hb_155159_010 Hb_155159_010 Hb_000086_050--Hb_155159_010 Hb_000345_490 Hb_000345_490 Hb_000024_120--Hb_000345_490 Hb_005610_080 Hb_005610_080 Hb_000024_120--Hb_005610_080 Hb_000024_120--Hb_009449_090 Hb_000024_120--Hb_005054_190 Hb_003430_030 Hb_003430_030 Hb_000024_120--Hb_003430_030 Hb_000116_510 Hb_000116_510 Hb_000024_120--Hb_000116_510 Hb_002571_030 Hb_002571_030 Hb_003638_010--Hb_002571_030 Hb_007818_040 Hb_007818_040 Hb_003638_010--Hb_007818_040 Hb_007305_020 Hb_007305_020 Hb_003638_010--Hb_007305_020 Hb_003638_010--Hb_009449_090 Hb_003638_010--Hb_000024_120 Hb_006573_160 Hb_006573_160 Hb_003638_010--Hb_006573_160 Hb_010346_020 Hb_010346_020 Hb_000988_030--Hb_010346_020 Hb_065379_010 Hb_065379_010 Hb_000988_030--Hb_065379_010 Hb_000988_030--Hb_003638_010 Hb_000732_070 Hb_000732_070 Hb_000988_030--Hb_000732_070 Hb_000988_030--Hb_000345_490 Hb_009449_090--Hb_007576_220 Hb_005539_040 Hb_005539_040 Hb_009449_090--Hb_005539_040 Hb_009449_090--Hb_002571_030 Hb_009449_090--Hb_007283_030 Hb_005054_190--Hb_003430_030 Hb_000363_280 Hb_000363_280 Hb_005054_190--Hb_000363_280 Hb_005054_190--Hb_005610_080 Hb_005054_190--Hb_000345_490 Hb_011918_050 Hb_011918_050 Hb_005054_190--Hb_011918_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
864.848 1397.09 879.155 330.162 874.112 584.594
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
211.55 108.854 124.731 252.392 800.685

CAGE analysis