Hb_000186_180

Information

Type -
Description -
Location Contig186: 249183-250076
Sequence    

Annotation

kegg
ID cam:101513522
description hepatoma-derived growth factor-related protein 2-like
nr
ID XP_012091283.1
description PREDICTED: uncharacterized protein LOC105649287 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JL21
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21166 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 051_A16.ab1: 249090-249789

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000186_180 0.0 - - PREDICTED: uncharacterized protein LOC105649287 [Jatropha curcas]
2 Hb_003654_020 0.0549248152 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
3 Hb_002818_160 0.0946235613 - - PREDICTED: uncharacterized protein LOC105642722 [Jatropha curcas]
4 Hb_000031_320 0.0977074488 - - unnamed protein product [Vitis vinifera]
5 Hb_000167_100 0.1057958968 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_002307_120 0.1077741442 - - scab resistance family protein [Populus trichocarpa]
7 Hb_001677_170 0.1119870054 - - hypothetical protein M569_03661, partial [Genlisea aurea]
8 Hb_003970_010 0.114523412 - - PREDICTED: sigma factor binding protein 1, chloroplastic-like [Populus euphratica]
9 Hb_001777_030 0.1148356193 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
10 Hb_005337_140 0.1152943684 - - PREDICTED: LOW QUALITY PROTEIN: wall-associated receptor kinase 1-like [Jatropha curcas]
11 Hb_003209_150 0.1155505459 - - CLE9, putative [Ricinus communis]
12 Hb_006243_010 0.1165093338 - - PREDICTED: cell wall protein IFF6 [Populus euphratica]
13 Hb_000732_300 0.1229112003 - - PREDICTED: uncharacterized protein LOC105649465 isoform X2 [Jatropha curcas]
14 Hb_002211_020 0.1261864774 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 5-like [Jatropha curcas]
15 Hb_002284_160 0.1322613697 - - glyceraldehyde 3-phosphate dehydrogenase, putative [Ricinus communis]
16 Hb_018134_010 0.136552845 transcription factor TF Family: Jumonji PREDICTED: lysine-specific demethylase JMJ706 isoform X1 [Jatropha curcas]
17 Hb_046739_010 0.137272196 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
18 Hb_004126_050 0.1376820638 - - PREDICTED: L-type lectin-domain containing receptor kinase VII.1 [Tarenaya hassleriana]
19 Hb_003767_060 0.1379052519 - - PREDICTED: serine/threonine-protein kinase CDL1 [Jatropha curcas]
20 Hb_019863_050 0.1392950256 - - PREDICTED: uncharacterized protein LOC103343426 [Prunus mume]

Gene co-expression network

sample Hb_000186_180 Hb_000186_180 Hb_003654_020 Hb_003654_020 Hb_000186_180--Hb_003654_020 Hb_002818_160 Hb_002818_160 Hb_000186_180--Hb_002818_160 Hb_000031_320 Hb_000031_320 Hb_000186_180--Hb_000031_320 Hb_000167_100 Hb_000167_100 Hb_000186_180--Hb_000167_100 Hb_002307_120 Hb_002307_120 Hb_000186_180--Hb_002307_120 Hb_001677_170 Hb_001677_170 Hb_000186_180--Hb_001677_170 Hb_003209_150 Hb_003209_150 Hb_003654_020--Hb_003209_150 Hb_000732_300 Hb_000732_300 Hb_003654_020--Hb_000732_300 Hb_003654_020--Hb_000031_320 Hb_003654_020--Hb_002307_120 Hb_003654_020--Hb_002818_160 Hb_002818_160--Hb_002307_120 Hb_003767_060 Hb_003767_060 Hb_002818_160--Hb_003767_060 Hb_002818_160--Hb_000031_320 Hb_002818_160--Hb_003209_150 Hb_046739_010 Hb_046739_010 Hb_000031_320--Hb_046739_010 Hb_000031_320--Hb_001677_170 Hb_011028_030 Hb_011028_030 Hb_000031_320--Hb_011028_030 Hb_002407_090 Hb_002407_090 Hb_000031_320--Hb_002407_090 Hb_003970_010 Hb_003970_010 Hb_000031_320--Hb_003970_010 Hb_000167_100--Hb_000031_320 Hb_001777_030 Hb_001777_030 Hb_000167_100--Hb_001777_030 Hb_019863_050 Hb_019863_050 Hb_000167_100--Hb_019863_050 Hb_000167_100--Hb_003654_020 Hb_000815_090 Hb_000815_090 Hb_000167_100--Hb_000815_090 Hb_002307_120--Hb_003209_150 Hb_005337_140 Hb_005337_140 Hb_002307_120--Hb_005337_140 Hb_002307_120--Hb_003767_060 Hb_001926_070 Hb_001926_070 Hb_001677_170--Hb_001926_070 Hb_111997_010 Hb_111997_010 Hb_001677_170--Hb_111997_010 Hb_000343_050 Hb_000343_050 Hb_001677_170--Hb_000343_050 Hb_006188_020 Hb_006188_020 Hb_001677_170--Hb_006188_020 Hb_001606_010 Hb_001606_010 Hb_001677_170--Hb_001606_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 42.9747 54.7506 26.5166 0.0987651 0.0585737
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0583839 0.0459134 0 0.111113 64.8985

CAGE analysis