Hb_000187_040

Information

Type -
Description -
Location Contig187: 50227-63964
Sequence    

Annotation

kegg
ID pop:POPTR_0017s02980g
description hypothetical protein
nr
ID XP_010660340.1
description PREDICTED: pyridoxal kinase isoform X5 [Vitis vinifera]
swissprot
ID Q8W1X2
description Pyridoxal kinase OS=Arabidopsis thaliana GN=PK PE=1 SV=2
trembl
ID A0A067LIQ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16353 PE=4 SV=1
Gene Ontology
ID GO:0008478
description pyridoxal kinase isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18466: 50272-61502 , PASA_asmbl_18467: 50272-63924
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000187_040 0.0 - - PREDICTED: pyridoxal kinase isoform X5 [Vitis vinifera]
2 Hb_168893_020 0.1027854689 - - PREDICTED: probable protein S-acyltransferase 15 [Jatropha curcas]
3 Hb_000210_060 0.1112062496 transcription factor TF Family: E2F-DP hypothetical protein JCGZ_08780 [Jatropha curcas]
4 Hb_000684_520 0.111727376 - - glutathione S-transferase L3-like [Jatropha curcas]
5 Hb_005276_040 0.1192474611 transcription factor TF Family: TRAF PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Jatropha curcas]
6 Hb_010560_050 0.1199093174 - - PREDICTED: acyl-protein thioesterase 1-like [Jatropha curcas]
7 Hb_001369_250 0.1200022858 - - PREDICTED: uncharacterized protein LOC105646469 isoform X1 [Jatropha curcas]
8 Hb_006538_090 0.1263802096 - - PREDICTED: IST1 homolog [Jatropha curcas]
9 Hb_005648_010 0.1296649082 - - PREDICTED: malate dehydrogenase, glyoxysomal isoform X1 [Jatropha curcas]
10 Hb_000665_140 0.1306850776 - - PREDICTED: protein MEMO1 [Jatropha curcas]
11 Hb_000107_270 0.130957962 - - Histone deacetylase 1 isoform 1 [Theobroma cacao]
12 Hb_000286_060 0.1321149987 - - PREDICTED: uncharacterized protein LOC105633357 [Jatropha curcas]
13 Hb_001946_390 0.1321642532 - - PREDICTED: NADH-cytochrome b5 reductase-like protein [Jatropha curcas]
14 Hb_014720_110 0.1329960746 - - PREDICTED: GDSL esterase/lipase At5g62930 [Tarenaya hassleriana]
15 Hb_015057_020 0.1331567726 - - PREDICTED: E3 SUMO-protein ligase MMS21 [Jatropha curcas]
16 Hb_000174_260 0.1342387568 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent) [Jatropha curcas]
17 Hb_000428_060 0.1347514594 - - malate dehydrogenase, putative [Ricinus communis]
18 Hb_003106_100 0.1354499802 - - mannose-1-phosphate guanyltransferase, putative [Ricinus communis]
19 Hb_004429_090 0.1364013365 - - PREDICTED: ras GTPase-activating protein-binding protein 1-like isoform X1 [Jatropha curcas]
20 Hb_000510_080 0.1373117395 - - hypothetical protein CICLE_v10021453mg [Citrus clementina]

Gene co-expression network

sample Hb_000187_040 Hb_000187_040 Hb_168893_020 Hb_168893_020 Hb_000187_040--Hb_168893_020 Hb_000210_060 Hb_000210_060 Hb_000187_040--Hb_000210_060 Hb_000684_520 Hb_000684_520 Hb_000187_040--Hb_000684_520 Hb_005276_040 Hb_005276_040 Hb_000187_040--Hb_005276_040 Hb_010560_050 Hb_010560_050 Hb_000187_040--Hb_010560_050 Hb_001369_250 Hb_001369_250 Hb_000187_040--Hb_001369_250 Hb_006538_090 Hb_006538_090 Hb_168893_020--Hb_006538_090 Hb_168893_020--Hb_000210_060 Hb_000555_100 Hb_000555_100 Hb_168893_020--Hb_000555_100 Hb_168893_020--Hb_001369_250 Hb_002477_290 Hb_002477_290 Hb_168893_020--Hb_002477_290 Hb_168893_020--Hb_005276_040 Hb_015057_020 Hb_015057_020 Hb_000210_060--Hb_015057_020 Hb_000210_060--Hb_002477_290 Hb_001898_050 Hb_001898_050 Hb_000210_060--Hb_001898_050 Hb_001510_020 Hb_001510_020 Hb_000210_060--Hb_001510_020 Hb_000210_060--Hb_005276_040 Hb_000684_520--Hb_001510_020 Hb_000684_520--Hb_168893_020 Hb_000684_520--Hb_010560_050 Hb_004429_090 Hb_004429_090 Hb_000684_520--Hb_004429_090 Hb_000684_520--Hb_000210_060 Hb_000174_260 Hb_000174_260 Hb_005276_040--Hb_000174_260 Hb_002045_060 Hb_002045_060 Hb_005276_040--Hb_002045_060 Hb_005276_040--Hb_015057_020 Hb_002392_010 Hb_002392_010 Hb_005276_040--Hb_002392_010 Hb_000428_060 Hb_000428_060 Hb_005276_040--Hb_000428_060 Hb_001221_030 Hb_001221_030 Hb_005276_040--Hb_001221_030 Hb_002631_010 Hb_002631_010 Hb_010560_050--Hb_002631_010 Hb_000025_190 Hb_000025_190 Hb_010560_050--Hb_000025_190 Hb_000700_040 Hb_000700_040 Hb_010560_050--Hb_000700_040 Hb_003633_050 Hb_003633_050 Hb_010560_050--Hb_003633_050 Hb_001085_240 Hb_001085_240 Hb_010560_050--Hb_001085_240 Hb_000286_060 Hb_000286_060 Hb_010560_050--Hb_000286_060 Hb_002675_140 Hb_002675_140 Hb_001369_250--Hb_002675_140 Hb_010174_150 Hb_010174_150 Hb_001369_250--Hb_010174_150 Hb_001369_250--Hb_000555_100 Hb_001369_250--Hb_010560_050 Hb_002357_060 Hb_002357_060 Hb_001369_250--Hb_002357_060 Hb_000665_050 Hb_000665_050 Hb_001369_250--Hb_000665_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.71045 2.16028 10.4814 14.4341 3.11556 3.94418
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.9256 14.8611 5.19398 17.7181 12.4037

CAGE analysis