Hb_000189_490

Information

Type -
Description -
Location Contig189: 387972-388994
Sequence    

Annotation

kegg
ID tcc:TCM_026400
description Sulfate/thiosulfate import ATP-binding protein cysA
nr
ID XP_007030630.1
description Sulfate/thiosulfate import ATP-binding protein cysA [Theobroma cacao]
swissprot
ID -
description -
trembl
ID A0A061F380
description Sulfate/thiosulfate import ATP-binding protein cysA OS=Theobroma cacao GN=TCM_026400 PE=4 SV=1
Gene Ontology
ID GO:0005524
description sulfate thiosulfate import atp-binding protein cysa

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000189_490 0.0 - - Sulfate/thiosulfate import ATP-binding protein cysA [Theobroma cacao]
2 Hb_031954_010 0.1410197347 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_001103_040 0.1416712053 - - hypothetical protein POPTR_0013s11170g [Populus trichocarpa]
4 Hb_003442_010 0.1442675138 - - PREDICTED: structural maintenance of chromosomes protein 4-like isoform X2 [Citrus sinensis]
5 Hb_004341_010 0.1667878291 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
6 Hb_001283_010 0.1672857364 transcription factor TF Family: LOB LOB domain-containing protein 15 [Populus tremula x Populus tremuloides]
7 Hb_000365_290 0.1684748037 - - PREDICTED: protein MTL1-like isoform X1 [Jatropha curcas]
8 Hb_002762_070 0.1728095942 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
9 Hb_004837_170 0.1812011322 - - PREDICTED: uncharacterized protein LOC105648284 [Jatropha curcas]
10 Hb_001481_020 0.1833526864 - - PREDICTED: L-type lectin-domain containing receptor kinase V.9-like [Jatropha curcas]
11 Hb_000077_460 0.1855655769 - - -
12 Hb_004136_050 0.1883976055 - - -
13 Hb_028207_030 0.1934597342 - - PREDICTED: non-specific lipid-transfer protein 8-like [Citrus sinensis]
14 Hb_136884_010 0.1955955142 - - Disease resistance protein RFL1, putative [Ricinus communis]
15 Hb_027445_080 0.1969355681 transcription factor TF Family: LOB LOB domain protein 25 [Populus trichocarpa]
16 Hb_183820_010 0.2002085081 - - Disease resistance protein RFL1, putative [Ricinus communis]
17 Hb_083493_020 0.2067735891 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera]
18 Hb_002282_030 0.2093412792 - - -
19 Hb_031862_090 0.2097736075 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like [Jatropha curcas]
20 Hb_017866_020 0.2105366991 transcription factor TF Family: WRKY WRKY transcription factor 40 [Jatropha curcas]

Gene co-expression network

sample Hb_000189_490 Hb_000189_490 Hb_031954_010 Hb_031954_010 Hb_000189_490--Hb_031954_010 Hb_001103_040 Hb_001103_040 Hb_000189_490--Hb_001103_040 Hb_003442_010 Hb_003442_010 Hb_000189_490--Hb_003442_010 Hb_004341_010 Hb_004341_010 Hb_000189_490--Hb_004341_010 Hb_001283_010 Hb_001283_010 Hb_000189_490--Hb_001283_010 Hb_000365_290 Hb_000365_290 Hb_000189_490--Hb_000365_290 Hb_031954_010--Hb_004341_010 Hb_031954_010--Hb_001283_010 Hb_002762_070 Hb_002762_070 Hb_031954_010--Hb_002762_070 Hb_028207_030 Hb_028207_030 Hb_031954_010--Hb_028207_030 Hb_000077_460 Hb_000077_460 Hb_031954_010--Hb_000077_460 Hb_004837_170 Hb_004837_170 Hb_031954_010--Hb_004837_170 Hb_011382_050 Hb_011382_050 Hb_001103_040--Hb_011382_050 Hb_001103_040--Hb_003442_010 Hb_083493_020 Hb_083493_020 Hb_001103_040--Hb_083493_020 Hb_027506_050 Hb_027506_050 Hb_001103_040--Hb_027506_050 Hb_009913_010 Hb_009913_010 Hb_001103_040--Hb_009913_010 Hb_001481_020 Hb_001481_020 Hb_003442_010--Hb_001481_020 Hb_183820_010 Hb_183820_010 Hb_003442_010--Hb_183820_010 Hb_003442_010--Hb_000365_290 Hb_003442_010--Hb_083493_020 Hb_004341_010--Hb_004837_170 Hb_004341_010--Hb_002762_070 Hb_004341_010--Hb_000077_460 Hb_004341_010--Hb_028207_030 Hb_004341_010--Hb_001283_010 Hb_001283_010--Hb_000077_460 Hb_004136_050 Hb_004136_050 Hb_001283_010--Hb_004136_050 Hb_017866_020 Hb_017866_020 Hb_001283_010--Hb_017866_020 Hb_002003_020 Hb_002003_020 Hb_001283_010--Hb_002003_020 Hb_000365_290--Hb_002762_070 Hb_006395_010 Hb_006395_010 Hb_000365_290--Hb_006395_010 Hb_000365_290--Hb_001283_010 Hb_027445_080 Hb_027445_080 Hb_000365_290--Hb_027445_080 Hb_000365_290--Hb_028207_030 Hb_000365_290--Hb_000077_460
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.317386 1.8033 0.0644329 1.36549 0.0417533 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.8377 0

CAGE analysis