Hb_000190_230

Information

Type -
Description -
Location Contig190: 331786-336338
Sequence    

Annotation

kegg
ID pmum:103334206
description sulfate transporter 3.1-like
nr
ID XP_012092183.1
description PREDICTED: sulfate transporter 3.1-like [Jatropha curcas]
swissprot
ID Q9SV13
description Sulfate transporter 3.1 OS=Arabidopsis thaliana GN=SULTR3;1 PE=2 SV=1
trembl
ID A0A067JPE7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21885 PE=4 SV=1
Gene Ontology
ID GO:0009507
description sulfate transporter -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18939: 331817-336395
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000190_230 0.0 - - PREDICTED: sulfate transporter 3.1-like [Jatropha curcas]
2 Hb_019654_180 0.0983460139 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
3 Hb_002235_070 0.0990469742 - - PREDICTED: uncharacterized protein LOC105644108 [Jatropha curcas]
4 Hb_000950_020 0.1053591861 - - PREDICTED: glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic [Jatropha curcas]
5 Hb_000711_030 0.1097673126 - - hypothetical protein POPTR_0019s02860g [Populus trichocarpa]
6 Hb_009838_070 0.1100416499 - - PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Jatropha curcas]
7 Hb_000590_110 0.1116450276 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000327_260 0.1134434524 - - conserved hypothetical protein [Ricinus communis]
9 Hb_137222_010 0.1143580848 - - PREDICTED: hippocampus abundant transcript-like protein 1 [Jatropha curcas]
10 Hb_003120_020 0.1200511016 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter B family member 13-like [Prunus mume]
11 Hb_004096_210 0.1205034133 - - PREDICTED: uncharacterized protein LOC105638707 isoform X2 [Jatropha curcas]
12 Hb_003602_100 0.120597655 - - Glutamyl-tRNA reductase 1, chloroplast precursor, putative [Ricinus communis]
13 Hb_000049_100 0.124278854 - - Photosystem II reaction center W protein, putative [Ricinus communis]
14 Hb_004650_050 0.1250464552 - - PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Jatropha curcas]
15 Hb_001195_290 0.1264753034 - - PREDICTED: uncharacterized protein LOC105633792 [Jatropha curcas]
16 Hb_001729_030 0.1295117915 - - hypothetical protein VITISV_044457 [Vitis vinifera]
17 Hb_009393_130 0.1300731101 - - PREDICTED: uncharacterized protein LOC105638053 isoform X4 [Jatropha curcas]
18 Hb_000539_040 0.1305537348 - - PREDICTED: uncharacterized protein LOC105636110 isoform X1 [Jatropha curcas]
19 Hb_007803_040 0.1310888485 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic [Jatropha curcas]
20 Hb_172426_060 0.133529683 - - PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Jatropha curcas]

Gene co-expression network

sample Hb_000190_230 Hb_000190_230 Hb_019654_180 Hb_019654_180 Hb_000190_230--Hb_019654_180 Hb_002235_070 Hb_002235_070 Hb_000190_230--Hb_002235_070 Hb_000950_020 Hb_000950_020 Hb_000190_230--Hb_000950_020 Hb_000711_030 Hb_000711_030 Hb_000190_230--Hb_000711_030 Hb_009838_070 Hb_009838_070 Hb_000190_230--Hb_009838_070 Hb_000590_110 Hb_000590_110 Hb_000190_230--Hb_000590_110 Hb_001729_030 Hb_001729_030 Hb_019654_180--Hb_001729_030 Hb_019654_180--Hb_009838_070 Hb_000951_150 Hb_000951_150 Hb_019654_180--Hb_000951_150 Hb_004032_280 Hb_004032_280 Hb_019654_180--Hb_004032_280 Hb_006831_090 Hb_006831_090 Hb_019654_180--Hb_006831_090 Hb_002235_070--Hb_000950_020 Hb_003602_100 Hb_003602_100 Hb_002235_070--Hb_003602_100 Hb_007803_040 Hb_007803_040 Hb_002235_070--Hb_007803_040 Hb_000049_100 Hb_000049_100 Hb_002235_070--Hb_000049_100 Hb_006970_030 Hb_006970_030 Hb_002235_070--Hb_006970_030 Hb_004920_020 Hb_004920_020 Hb_000950_020--Hb_004920_020 Hb_000950_020--Hb_006970_030 Hb_000950_020--Hb_000711_030 Hb_001159_070 Hb_001159_070 Hb_000950_020--Hb_001159_070 Hb_000544_070 Hb_000544_070 Hb_000950_020--Hb_000544_070 Hb_004650_050 Hb_004650_050 Hb_000711_030--Hb_004650_050 Hb_000711_030--Hb_009838_070 Hb_000711_030--Hb_001159_070 Hb_000327_260 Hb_000327_260 Hb_000711_030--Hb_000327_260 Hb_005000_110 Hb_005000_110 Hb_000711_030--Hb_005000_110 Hb_009838_070--Hb_004650_050 Hb_009838_070--Hb_000327_260 Hb_009393_130 Hb_009393_130 Hb_009838_070--Hb_009393_130 Hb_003680_060 Hb_003680_060 Hb_009838_070--Hb_003680_060 Hb_004096_210 Hb_004096_210 Hb_009838_070--Hb_004096_210 Hb_000139_360 Hb_000139_360 Hb_000590_110--Hb_000139_360 Hb_002042_210 Hb_002042_210 Hb_000590_110--Hb_002042_210 Hb_044478_010 Hb_044478_010 Hb_000590_110--Hb_044478_010 Hb_000590_110--Hb_000049_100 Hb_000369_110 Hb_000369_110 Hb_000590_110--Hb_000369_110 Hb_008195_090 Hb_008195_090 Hb_000590_110--Hb_008195_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.542064 0.288232 14.6244 9.39375 0.544763 0.339435
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.39857 0.285116 0.298801 1.04181 20.6855

CAGE analysis