Hb_000192_080

Information

Type -
Description -
Location Contig192: 53715-59562
Sequence    

Annotation

kegg
ID rcu:RCOM_0855720
description Serine/threonine-protein kinase SAPK3, putative (EC:2.7.11.1)
nr
ID XP_012081018.1
description PREDICTED: serine/threonine-protein kinase SAPK3 isoform X1 [Jatropha curcas]
swissprot
ID P0C5D6
description Serine/threonine-protein kinase SAPK3 OS=Oryza sativa subsp. japonica GN=SAPK3 PE=1 SV=1
trembl
ID A0A067KF14
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17137 PE=4 SV=1
Gene Ontology
ID GO:0004672
description serine threonine-protein kinase sapk3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19135: 53770-59885 , PASA_asmbl_19136: 54793-55282 , PASA_asmbl_19137: 55303-55565
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000192_080 0.0 - - PREDICTED: serine/threonine-protein kinase SAPK3 isoform X1 [Jatropha curcas]
2 Hb_007638_030 0.0641340654 - - PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN [Jatropha curcas]
3 Hb_000009_560 0.0645844028 - - PREDICTED: extra-large guanine nucleotide-binding protein 1 [Jatropha curcas]
4 Hb_012322_010 0.0672165206 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
5 Hb_000665_060 0.0722840346 - - PREDICTED: trafficking protein particle complex II-specific subunit 120 homolog [Jatropha curcas]
6 Hb_000208_280 0.0728696532 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 78 [Jatropha curcas]
7 Hb_004567_090 0.0731305596 - - PREDICTED: GPI transamidase component PIG-T [Jatropha curcas]
8 Hb_000083_120 0.0742343034 - - transcription factor, putative [Ricinus communis]
9 Hb_004672_040 0.0748468578 - - PREDICTED: SEC1 family transport protein SLY1-like [Populus euphratica]
10 Hb_002110_190 0.0756335508 - - PREDICTED: pentatricopeptide repeat-containing protein At5g27460 [Jatropha curcas]
11 Hb_002675_070 0.0764137351 - - PREDICTED: protein CASC3 [Jatropha curcas]
12 Hb_001500_140 0.076486076 - - pelota, putative [Ricinus communis]
13 Hb_001377_490 0.0773706079 - - PREDICTED: uncharacterized protein LOC105642821 [Jatropha curcas]
14 Hb_001163_100 0.0784077154 - - serine/threonine protein kinase, putative [Ricinus communis]
15 Hb_012498_010 0.0790218355 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM44-2 [Jatropha curcas]
16 Hb_054865_150 0.0794576698 - - PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Jatropha curcas]
17 Hb_008970_030 0.0797342756 - - arf gtpase-activating protein, putative [Ricinus communis]
18 Hb_000890_210 0.0801866536 - - PREDICTED: serine/threonine-protein kinase PBS1 isoform X1 [Eucalyptus grandis]
19 Hb_000127_040 0.0812307027 - - PREDICTED: protein S-acyltransferase 8-like [Jatropha curcas]
20 Hb_000156_010 0.0818140371 - - phospho-n-acetylmuramoyl-pentapeptide-transferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000192_080 Hb_000192_080 Hb_007638_030 Hb_007638_030 Hb_000192_080--Hb_007638_030 Hb_000009_560 Hb_000009_560 Hb_000192_080--Hb_000009_560 Hb_012322_010 Hb_012322_010 Hb_000192_080--Hb_012322_010 Hb_000665_060 Hb_000665_060 Hb_000192_080--Hb_000665_060 Hb_000208_280 Hb_000208_280 Hb_000192_080--Hb_000208_280 Hb_004567_090 Hb_004567_090 Hb_000192_080--Hb_004567_090 Hb_000159_090 Hb_000159_090 Hb_007638_030--Hb_000159_090 Hb_010964_040 Hb_010964_040 Hb_007638_030--Hb_010964_040 Hb_000140_280 Hb_000140_280 Hb_007638_030--Hb_000140_280 Hb_000429_150 Hb_000429_150 Hb_007638_030--Hb_000429_150 Hb_007638_030--Hb_004567_090 Hb_002110_190 Hb_002110_190 Hb_007638_030--Hb_002110_190 Hb_001377_490 Hb_001377_490 Hb_000009_560--Hb_001377_490 Hb_015934_040 Hb_015934_040 Hb_000009_560--Hb_015934_040 Hb_001538_130 Hb_001538_130 Hb_000009_560--Hb_001538_130 Hb_003168_110 Hb_003168_110 Hb_000009_560--Hb_003168_110 Hb_000083_120 Hb_000083_120 Hb_000009_560--Hb_000083_120 Hb_187953_010 Hb_187953_010 Hb_012322_010--Hb_187953_010 Hb_012322_010--Hb_007638_030 Hb_000212_380 Hb_000212_380 Hb_012322_010--Hb_000212_380 Hb_012322_010--Hb_000429_150 Hb_012322_010--Hb_000140_280 Hb_000174_180 Hb_000174_180 Hb_000665_060--Hb_000174_180 Hb_000156_010 Hb_000156_010 Hb_000665_060--Hb_000156_010 Hb_000254_090 Hb_000254_090 Hb_000665_060--Hb_000254_090 Hb_009218_010 Hb_009218_010 Hb_000665_060--Hb_009218_010 Hb_000665_060--Hb_000009_560 Hb_000487_270 Hb_000487_270 Hb_000208_280--Hb_000487_270 Hb_012114_100 Hb_012114_100 Hb_000208_280--Hb_012114_100 Hb_000140_350 Hb_000140_350 Hb_000208_280--Hb_000140_350 Hb_001679_050 Hb_001679_050 Hb_000208_280--Hb_001679_050 Hb_000836_280 Hb_000836_280 Hb_000208_280--Hb_000836_280 Hb_004109_080 Hb_004109_080 Hb_004567_090--Hb_004109_080 Hb_004567_090--Hb_002110_190 Hb_007479_040 Hb_007479_040 Hb_004567_090--Hb_007479_040 Hb_012498_010 Hb_012498_010 Hb_004567_090--Hb_012498_010 Hb_003411_040 Hb_003411_040 Hb_004567_090--Hb_003411_040 Hb_054865_150 Hb_054865_150 Hb_004567_090--Hb_054865_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.9441 21.9882 12.7043 31.5905 14.3301 30.5288
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
19.6294 19.6876 27.8654 23.7793 21.7917

CAGE analysis