Hb_000193_030

Information

Type -
Description -
Location Contig193: 24681-25865
Sequence    

Annotation

kegg
ID mtr:MTR_5g022620
description Atfp6-like protein
nr
ID XP_012088494.1
description PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curcas]
swissprot
ID Q9SZN7
description Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
trembl
ID A0A067JWQ7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25377 PE=4 SV=1
Gene Ontology
ID GO:0005886
description heavy metal-associated isoprenylated plant protein 26

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000193_030 0.0 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curcas]
2 Hb_094132_010 0.0402330032 - - hypothetical protein POPTR_0018s03360g [Populus trichocarpa]
3 Hb_103093_010 0.1599948425 - - PREDICTED: wall-associated receptor kinase 4-like [Elaeis guineensis]
4 Hb_163132_010 0.179423352 - - -
5 Hb_007356_010 0.180540072 - - CTV.19 [Citrus trifoliata]
6 Hb_007290_020 0.1820732093 - - PREDICTED: subtilisin-like protease SBT4.14 [Jatropha curcas]
7 Hb_068804_060 0.1821177711 - - PREDICTED: ABC transporter G family member 17-like [Jatropha curcas]
8 Hb_000300_140 0.1839444647 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
9 Hb_000671_040 0.192156218 - - -
10 Hb_033312_110 0.2047238843 - - -
11 Hb_005723_070 0.2047568892 - - hypothetical protein CISIN_1g011514mg [Citrus sinensis]
12 Hb_000066_180 0.2110575782 - - hypothetical protein POPTR_0008s02710g [Populus trichocarpa]
13 Hb_021943_070 0.2128526154 - - -
14 Hb_020532_010 0.2175449964 - - PREDICTED: uncharacterized protein LOC105775165 [Gossypium raimondii]
15 Hb_004907_030 0.2183608874 - - hypothetical protein POPTR_0012s032802g, partial [Populus trichocarpa]
16 Hb_000340_330 0.2198462072 - - PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.6 [Jatropha curcas]
17 Hb_002450_130 0.2198547828 - - hypothetical protein JCGZ_06565 [Jatropha curcas]
18 Hb_002972_060 0.2205069845 transcription factor TF Family: M-type mads box protein, putative [Ricinus communis]
19 Hb_000130_170 0.2286650186 - - -
20 Hb_002126_020 0.2347854975 - - ferrochelatase [Medicago truncatula]

Gene co-expression network

sample Hb_000193_030 Hb_000193_030 Hb_094132_010 Hb_094132_010 Hb_000193_030--Hb_094132_010 Hb_103093_010 Hb_103093_010 Hb_000193_030--Hb_103093_010 Hb_163132_010 Hb_163132_010 Hb_000193_030--Hb_163132_010 Hb_007356_010 Hb_007356_010 Hb_000193_030--Hb_007356_010 Hb_007290_020 Hb_007290_020 Hb_000193_030--Hb_007290_020 Hb_068804_060 Hb_068804_060 Hb_000193_030--Hb_068804_060 Hb_094132_010--Hb_103093_010 Hb_094132_010--Hb_163132_010 Hb_000671_040 Hb_000671_040 Hb_094132_010--Hb_000671_040 Hb_094132_010--Hb_007356_010 Hb_094132_010--Hb_007290_020 Hb_000340_330 Hb_000340_330 Hb_103093_010--Hb_000340_330 Hb_000130_170 Hb_000130_170 Hb_103093_010--Hb_000130_170 Hb_021943_070 Hb_021943_070 Hb_103093_010--Hb_021943_070 Hb_005723_070 Hb_005723_070 Hb_103093_010--Hb_005723_070 Hb_163132_010--Hb_007356_010 Hb_163132_010--Hb_007290_020 Hb_163132_010--Hb_068804_060 Hb_000300_140 Hb_000300_140 Hb_163132_010--Hb_000300_140 Hb_033312_110 Hb_033312_110 Hb_163132_010--Hb_033312_110 Hb_004907_030 Hb_004907_030 Hb_163132_010--Hb_004907_030 Hb_007356_010--Hb_007290_020 Hb_007356_010--Hb_068804_060 Hb_007356_010--Hb_000300_140 Hb_007356_010--Hb_033312_110 Hb_007356_010--Hb_004907_030 Hb_007290_020--Hb_068804_060 Hb_007290_020--Hb_000300_140 Hb_007290_020--Hb_033312_110 Hb_007290_020--Hb_004907_030 Hb_068804_060--Hb_000300_140 Hb_068804_060--Hb_033312_110 Hb_068804_060--Hb_004907_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.103857 0 1.15813 0 2.05179
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0966184 0

CAGE analysis