Hb_000194_080

Information

Type -
Description -
Location Contig194: 153912-156319
Sequence    

Annotation

kegg
ID rcu:RCOM_1333460
description hypothetical protein
nr
ID KDP29976.1
description hypothetical protein JCGZ_18743 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K169
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18743 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19370: 153736-156719
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000194_080 0.0 - - hypothetical protein JCGZ_18743 [Jatropha curcas]
2 Hb_003064_010 0.0785432431 - - Senescence-related gene 1 [Theobroma cacao]
3 Hb_000029_420 0.084196439 - - PREDICTED: putative lipid-transfer protein DIR1 [Jatropha curcas]
4 Hb_001473_100 0.1198854555 - - chalcone synthase 1 [Jatropha curcas]
5 Hb_002809_020 0.123154464 - - PREDICTED: leucoanthocyanidin dioxygenase [Jatropha curcas]
6 Hb_000815_280 0.1266236021 - - PREDICTED: phosphate transporter PHO1 homolog 3 [Jatropha curcas]
7 Hb_000086_730 0.128589172 - - PREDICTED: feruloyl CoA ortho-hydroxylase 1-like [Jatropha curcas]
8 Hb_004055_080 0.1313940738 - - calmodulin binding protein, putative [Ricinus communis]
9 Hb_001623_400 0.1339161854 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000625_130 0.1346845783 - - PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Jatropha curcas]
11 Hb_018591_010 0.1376606609 - - kinase, putative [Ricinus communis]
12 Hb_111985_160 0.1395935341 - - hypothetical protein B456_010G008900 [Gossypium raimondii]
13 Hb_025469_040 0.1410178907 - - PREDICTED: acidic mammalian chitinase-like [Jatropha curcas]
14 Hb_098030_010 0.1427686391 - - hypothetical protein JCGZ_06251 [Jatropha curcas]
15 Hb_131864_020 0.1437641843 - - PREDICTED: anthocyanidin reductase [Jatropha curcas]
16 Hb_000917_330 0.1442809358 - - PREDICTED: leucoanthocyanidin reductase-like [Jatropha curcas]
17 Hb_000589_100 0.1445657868 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
18 Hb_008418_010 0.1448481096 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH93-like [Jatropha curcas]
19 Hb_049677_010 0.1453746839 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
20 Hb_000347_230 0.1456680042 - - inter-alpha-trypsin inhibitor heavy chain, putative [Ricinus communis]

Gene co-expression network

sample Hb_000194_080 Hb_000194_080 Hb_003064_010 Hb_003064_010 Hb_000194_080--Hb_003064_010 Hb_000029_420 Hb_000029_420 Hb_000194_080--Hb_000029_420 Hb_001473_100 Hb_001473_100 Hb_000194_080--Hb_001473_100 Hb_002809_020 Hb_002809_020 Hb_000194_080--Hb_002809_020 Hb_000815_280 Hb_000815_280 Hb_000194_080--Hb_000815_280 Hb_000086_730 Hb_000086_730 Hb_000194_080--Hb_000086_730 Hb_003064_010--Hb_000029_420 Hb_004021_100 Hb_004021_100 Hb_003064_010--Hb_004021_100 Hb_001623_400 Hb_001623_400 Hb_003064_010--Hb_001623_400 Hb_004055_080 Hb_004055_080 Hb_003064_010--Hb_004055_080 Hb_049677_010 Hb_049677_010 Hb_003064_010--Hb_049677_010 Hb_111985_160 Hb_111985_160 Hb_000029_420--Hb_111985_160 Hb_000029_420--Hb_004055_080 Hb_111693_010 Hb_111693_010 Hb_000029_420--Hb_111693_010 Hb_001377_480 Hb_001377_480 Hb_000029_420--Hb_001377_480 Hb_000631_130 Hb_000631_130 Hb_001473_100--Hb_000631_130 Hb_025469_040 Hb_025469_040 Hb_001473_100--Hb_025469_040 Hb_131864_020 Hb_131864_020 Hb_001473_100--Hb_131864_020 Hb_001473_100--Hb_004055_080 Hb_000038_090 Hb_000038_090 Hb_001473_100--Hb_000038_090 Hb_007044_070 Hb_007044_070 Hb_001473_100--Hb_007044_070 Hb_007017_120 Hb_007017_120 Hb_002809_020--Hb_007017_120 Hb_178252_010 Hb_178252_010 Hb_002809_020--Hb_178252_010 Hb_098030_010 Hb_098030_010 Hb_002809_020--Hb_098030_010 Hb_055154_010 Hb_055154_010 Hb_002809_020--Hb_055154_010 Hb_003166_020 Hb_003166_020 Hb_002809_020--Hb_003166_020 Hb_008418_010 Hb_008418_010 Hb_002809_020--Hb_008418_010 Hb_000815_280--Hb_131864_020 Hb_000625_130 Hb_000625_130 Hb_000815_280--Hb_000625_130 Hb_000815_280--Hb_025469_040 Hb_000815_280--Hb_000029_420 Hb_000815_280--Hb_111985_160 Hb_005000_040 Hb_005000_040 Hb_000086_730--Hb_005000_040 Hb_000086_730--Hb_003064_010 Hb_080225_010 Hb_080225_010 Hb_000086_730--Hb_080225_010 Hb_000347_530 Hb_000347_530 Hb_000086_730--Hb_000347_530 Hb_000800_060 Hb_000800_060 Hb_000086_730--Hb_000800_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.016965 0.633259 1.90406 2.02322 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0244561 0 8.11171 0.0511721

CAGE analysis