Hb_000200_120

Information

Type -
Description -
Location Contig200: 144025-147608
Sequence    

Annotation

kegg
ID rcu:RCOM_0577600
description fructose-bisphosphate aldolase, putative (EC:4.1.2.13)
nr
ID XP_012075703.1
description PREDICTED: probable fructose-bisphosphate aldolase 3, chloroplastic [Jatropha curcas]
swissprot
ID Q9ZU52
description Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1
trembl
ID A0A067KRU0
description Fructose-bisphosphate aldolase OS=Jatropha curcas GN=JCGZ_09293 PE=3 SV=1
Gene Ontology
ID GO:0005739
description probable fructose-bisphosphate aldolase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20209: 144031-147629 , PASA_asmbl_20210: 144869-145027
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000200_120 0.0 - - PREDICTED: probable fructose-bisphosphate aldolase 3, chloroplastic [Jatropha curcas]
2 Hb_002217_030 0.0640999957 - - PREDICTED: DNA (cytosine-5)-methyltransferase DRM2 isoform X1 [Jatropha curcas]
3 Hb_003464_080 0.0731876017 - - PREDICTED: pyruvate kinase, cytosolic isozyme-like [Jatropha curcas]
4 Hb_001178_070 0.0818171315 - - PREDICTED: BTB/POZ domain-containing protein FBL11 [Jatropha curcas]
5 Hb_000116_410 0.0852408776 - - hypothetical protein JCGZ_22416 [Jatropha curcas]
6 Hb_001860_030 0.0871716407 - - PREDICTED: cleavage stimulation factor subunit 77 isoform X5 [Jatropha curcas]
7 Hb_143629_110 0.0892700365 - - glutamyl-tRNA synthetase, cytoplasmic, putative [Ricinus communis]
8 Hb_000120_060 0.0914707456 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-1 [Populus euphratica]
9 Hb_001635_090 0.0935722551 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 7 isoform X1 [Populus euphratica]
10 Hb_002783_240 0.0937461732 - - PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 [Jatropha curcas]
11 Hb_001235_140 0.0977512445 - - PREDICTED: protein arginine N-methyltransferase 1.6 [Jatropha curcas]
12 Hb_001232_010 0.09904103 - - PREDICTED: uncharacterized protein LOC105634976 [Jatropha curcas]
13 Hb_000907_110 0.101333337 - - dihydroxyacetone kinase family protein [Populus trichocarpa]
14 Hb_000020_150 0.1019518169 - - PREDICTED: uncharacterized protein LOC105636325 [Jatropha curcas]
15 Hb_000140_480 0.1025611958 - - PREDICTED: uncharacterized protein LOC105637350 [Jatropha curcas]
16 Hb_000205_100 0.1031920101 - - PREDICTED: exportin-4 [Jatropha curcas]
17 Hb_000302_310 0.1036839965 - - PREDICTED: glutaminyl-peptide cyclotransferase-like [Jatropha curcas]
18 Hb_001946_010 0.1040211106 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
19 Hb_010142_030 0.104087663 - - PREDICTED: isoamylase 3, chloroplastic isoform X2 [Jatropha curcas]
20 Hb_034552_030 0.105387138 - - PREDICTED: pleckstrin homology domain-containing protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_000200_120 Hb_000200_120 Hb_002217_030 Hb_002217_030 Hb_000200_120--Hb_002217_030 Hb_003464_080 Hb_003464_080 Hb_000200_120--Hb_003464_080 Hb_001178_070 Hb_001178_070 Hb_000200_120--Hb_001178_070 Hb_000116_410 Hb_000116_410 Hb_000200_120--Hb_000116_410 Hb_001860_030 Hb_001860_030 Hb_000200_120--Hb_001860_030 Hb_143629_110 Hb_143629_110 Hb_000200_120--Hb_143629_110 Hb_002217_030--Hb_003464_080 Hb_000182_040 Hb_000182_040 Hb_002217_030--Hb_000182_040 Hb_001232_010 Hb_001232_010 Hb_002217_030--Hb_001232_010 Hb_002217_030--Hb_001860_030 Hb_001235_140 Hb_001235_140 Hb_002217_030--Hb_001235_140 Hb_000089_120 Hb_000089_120 Hb_003464_080--Hb_000089_120 Hb_003464_080--Hb_143629_110 Hb_116349_070 Hb_116349_070 Hb_003464_080--Hb_116349_070 Hb_001635_090 Hb_001635_090 Hb_003464_080--Hb_001635_090 Hb_009486_180 Hb_009486_180 Hb_001178_070--Hb_009486_180 Hb_000205_100 Hb_000205_100 Hb_001178_070--Hb_000205_100 Hb_000011_230 Hb_000011_230 Hb_001178_070--Hb_000011_230 Hb_000613_050 Hb_000613_050 Hb_001178_070--Hb_000613_050 Hb_004954_070 Hb_004954_070 Hb_001178_070--Hb_004954_070 Hb_000181_400 Hb_000181_400 Hb_001178_070--Hb_000181_400 Hb_000116_410--Hb_001635_090 Hb_010142_030 Hb_010142_030 Hb_000116_410--Hb_010142_030 Hb_000191_150 Hb_000191_150 Hb_000116_410--Hb_000191_150 Hb_004143_040 Hb_004143_040 Hb_000116_410--Hb_004143_040 Hb_000116_410--Hb_001178_070 Hb_028285_010 Hb_028285_010 Hb_000116_410--Hb_028285_010 Hb_000062_270 Hb_000062_270 Hb_001860_030--Hb_000062_270 Hb_028512_020 Hb_028512_020 Hb_001860_030--Hb_028512_020 Hb_013399_020 Hb_013399_020 Hb_001860_030--Hb_013399_020 Hb_000981_030 Hb_000981_030 Hb_001860_030--Hb_000981_030 Hb_004324_130 Hb_004324_130 Hb_001860_030--Hb_004324_130 Hb_001860_030--Hb_001635_090 Hb_032202_200 Hb_032202_200 Hb_143629_110--Hb_032202_200 Hb_123903_010 Hb_123903_010 Hb_143629_110--Hb_123903_010 Hb_000390_320 Hb_000390_320 Hb_143629_110--Hb_000390_320 Hb_001617_060 Hb_001617_060 Hb_143629_110--Hb_001617_060 Hb_025477_040 Hb_025477_040 Hb_143629_110--Hb_025477_040 Hb_000617_180 Hb_000617_180 Hb_143629_110--Hb_000617_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
62.4483 58.8123 40.7354 86.2916 87.6594 78.9402
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
73.7873 53.0158 45.7335 126.453 32.526

CAGE analysis