Hb_000200_200

Information

Type -
Description -
Location Contig200: 242585-249453
Sequence    

Annotation

kegg
ID rcu:RCOM_0577390
description hypothetical protein
nr
ID XP_012075710.1
description PREDICTED: putative zinc finger protein At1g68190 isoform X2 [Jatropha curcas]
swissprot
ID Q9C9F4
description Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana GN=At1g68190 PE=2 SV=1
trembl
ID A0A067KFJ7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09299 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000200_200 0.0 - - PREDICTED: putative zinc finger protein At1g68190 isoform X2 [Jatropha curcas]
2 Hb_005656_190 0.1262080966 - - proteasome subunit beta type 6,9, putative [Ricinus communis]
3 Hb_000340_500 0.1553496738 - - PREDICTED: aldo-keto reductase-like [Jatropha curcas]
4 Hb_189216_030 0.1661035414 - - Pleiotropic drug resistance protein, putative [Ricinus communis]
5 Hb_000130_450 0.179740706 - - conserved hypothetical protein [Ricinus communis]
6 Hb_185224_010 0.1826536471 - - zinc finger protein, putative [Ricinus communis]
7 Hb_001959_010 0.1946099941 - - myosin XI, putative [Ricinus communis]
8 Hb_001141_110 0.198615489 - - hypothetical protein JCGZ_02206 [Jatropha curcas]
9 Hb_000027_040 0.2025148556 - - PREDICTED: uncharacterized protein LOC105636980 [Jatropha curcas]
10 Hb_098533_020 0.206365341 - - PREDICTED: zinc finger AN1 domain-containing stress-associated protein 12 [Jatropha curcas]
11 Hb_000031_080 0.2068062218 - - PREDICTED: uncharacterized protein LOC105637482 [Jatropha curcas]
12 Hb_001114_080 0.2068674128 - - hypothetical protein PRUPE_ppa019021mg, partial [Prunus persica]
13 Hb_000487_120 0.2134955355 - - conserved hypothetical protein [Ricinus communis]
14 Hb_007441_260 0.2174845913 - - PREDICTED: ATP synthase subunit delta', mitochondrial-like [Jatropha curcas]
15 Hb_000340_310 0.220745397 - - PREDICTED: putative E3 ubiquitin-protein ligase RF298 [Jatropha curcas]
16 Hb_117807_010 0.2208250579 - - PREDICTED: uncharacterized protein LOC105635720 [Jatropha curcas]
17 Hb_002774_050 0.2251173392 - - PREDICTED: uncharacterized protein LOC105630601 [Jatropha curcas]
18 Hb_002026_120 0.2254053458 - - hypothetical protein CISIN_1g025276mg [Citrus sinensis]
19 Hb_036790_020 0.2255174358 - - PREDICTED: polyadenylate-binding protein 3 [Jatropha curcas]
20 Hb_003994_190 0.2263743936 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000200_200 Hb_000200_200 Hb_005656_190 Hb_005656_190 Hb_000200_200--Hb_005656_190 Hb_000340_500 Hb_000340_500 Hb_000200_200--Hb_000340_500 Hb_189216_030 Hb_189216_030 Hb_000200_200--Hb_189216_030 Hb_000130_450 Hb_000130_450 Hb_000200_200--Hb_000130_450 Hb_185224_010 Hb_185224_010 Hb_000200_200--Hb_185224_010 Hb_001959_010 Hb_001959_010 Hb_000200_200--Hb_001959_010 Hb_005656_190--Hb_000340_500 Hb_001141_110 Hb_001141_110 Hb_005656_190--Hb_001141_110 Hb_000167_030 Hb_000167_030 Hb_005656_190--Hb_000167_030 Hb_009778_040 Hb_009778_040 Hb_005656_190--Hb_009778_040 Hb_003181_050 Hb_003181_050 Hb_005656_190--Hb_003181_050 Hb_002081_030 Hb_002081_030 Hb_000340_500--Hb_002081_030 Hb_000809_060 Hb_000809_060 Hb_000340_500--Hb_000809_060 Hb_000258_250 Hb_000258_250 Hb_000340_500--Hb_000258_250 Hb_002686_180 Hb_002686_180 Hb_000340_500--Hb_002686_180 Hb_024074_010 Hb_024074_010 Hb_000340_500--Hb_024074_010 Hb_001726_040 Hb_001726_040 Hb_000340_500--Hb_001726_040 Hb_003994_190 Hb_003994_190 Hb_189216_030--Hb_003994_190 Hb_000211_030 Hb_000211_030 Hb_189216_030--Hb_000211_030 Hb_002374_080 Hb_002374_080 Hb_189216_030--Hb_002374_080 Hb_007044_120 Hb_007044_120 Hb_189216_030--Hb_007044_120 Hb_009620_020 Hb_009620_020 Hb_189216_030--Hb_009620_020 Hb_020025_040 Hb_020025_040 Hb_189216_030--Hb_020025_040 Hb_014720_010 Hb_014720_010 Hb_000130_450--Hb_014720_010 Hb_005375_050 Hb_005375_050 Hb_000130_450--Hb_005375_050 Hb_000008_380 Hb_000008_380 Hb_000130_450--Hb_000008_380 Hb_000130_450--Hb_005656_190 Hb_000027_040 Hb_000027_040 Hb_000130_450--Hb_000027_040 Hb_000031_080 Hb_000031_080 Hb_185224_010--Hb_000031_080 Hb_008215_030 Hb_008215_030 Hb_185224_010--Hb_008215_030 Hb_185224_010--Hb_000340_500 Hb_015430_010 Hb_015430_010 Hb_185224_010--Hb_015430_010 Hb_000173_050 Hb_000173_050 Hb_185224_010--Hb_000173_050 Hb_002671_090 Hb_002671_090 Hb_001959_010--Hb_002671_090 Hb_001114_080 Hb_001114_080 Hb_001959_010--Hb_001114_080 Hb_000025_370 Hb_000025_370 Hb_001959_010--Hb_000025_370 Hb_000394_110 Hb_000394_110 Hb_001959_010--Hb_000394_110 Hb_009111_020 Hb_009111_020 Hb_001959_010--Hb_009111_020 Hb_000300_700 Hb_000300_700 Hb_001959_010--Hb_000300_700
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.456862 0.530372 3.87307 1.72776 0.230328 0.112869
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.79129 5.12315 5.1032 0.998884 0.191049

CAGE analysis