Hb_000200_330

Information

Type -
Description -
Location Contig200: 358040-361099
Sequence    

Annotation

kegg
ID rcu:RCOM_0576850
description ATP binding protein, putative (EC:1.3.1.74)
nr
ID XP_012075725.1
description PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
swissprot
ID Q9C9N5
description Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 OS=Arabidopsis thaliana GN=At1g66830 PE=2 SV=1
trembl
ID A0A067KRV8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09313 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable inactive leucine-rich repeat receptor-like protein kinase at1g66830

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20229: 358072-361040
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000200_330 0.0 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
2 Hb_022693_110 0.0801711313 - - phosphate transporter [Manihot esculenta]
3 Hb_050847_040 0.1177795415 - - PREDICTED: uncharacterized protein LOC105649141 [Jatropha curcas]
4 Hb_004545_080 0.1219662607 - - protein with unknown function [Ricinus communis]
5 Hb_001104_150 0.1310962203 - - PREDICTED: protein ROS1 [Jatropha curcas]
6 Hb_000689_050 0.1329454528 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002942_140 0.137268369 - - PREDICTED: dual specificity protein phosphatase PHS1 [Jatropha curcas]
8 Hb_000483_080 0.1376752592 - - hypothetical protein CISIN_1g000833mg [Citrus sinensis]
9 Hb_005144_060 0.1392205954 - - Disease resistance family protein / LRR family protein, putative [Theobroma cacao]
10 Hb_001123_310 0.1398650137 - - PREDICTED: coiled-coil domain-containing protein SCD2 [Jatropha curcas]
11 Hb_000120_300 0.1405519348 - - PREDICTED: kinesin-like calmodulin-binding protein isoform X1 [Eucalyptus grandis]
12 Hb_004330_020 0.1406106809 - - PREDICTED: uncharacterized protein LOC105650086 [Jatropha curcas]
13 Hb_006120_060 0.1425579027 - - O-acetyltransferase family protein isoform 1 [Theobroma cacao]
14 Hb_000120_740 0.1434498269 desease resistance Gene Name: VARLMGL conserved hypothetical protein [Ricinus communis]
15 Hb_000327_360 0.1450376501 - - unnamed protein product [Coffea canephora]
16 Hb_003050_360 0.1459237631 - - PREDICTED: tobamovirus multiplication protein 1 isoform X2 [Jatropha curcas]
17 Hb_000207_350 0.1464940555 - - PREDICTED: embryogenesis-associated protein EMB8 [Jatropha curcas]
18 Hb_005000_010 0.1473313953 - - PREDICTED: K(+) efflux antiporter 4 isoform X1 [Jatropha curcas]
19 Hb_004994_330 0.1482828936 - - DNA binding protein, putative [Ricinus communis]
20 Hb_000834_180 0.1484239648 - - PREDICTED: kinesin-13A-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000200_330 Hb_000200_330 Hb_022693_110 Hb_022693_110 Hb_000200_330--Hb_022693_110 Hb_050847_040 Hb_050847_040 Hb_000200_330--Hb_050847_040 Hb_004545_080 Hb_004545_080 Hb_000200_330--Hb_004545_080 Hb_001104_150 Hb_001104_150 Hb_000200_330--Hb_001104_150 Hb_000689_050 Hb_000689_050 Hb_000200_330--Hb_000689_050 Hb_002942_140 Hb_002942_140 Hb_000200_330--Hb_002942_140 Hb_048476_140 Hb_048476_140 Hb_022693_110--Hb_048476_140 Hb_000076_030 Hb_000076_030 Hb_022693_110--Hb_000076_030 Hb_011174_040 Hb_011174_040 Hb_022693_110--Hb_011174_040 Hb_022693_110--Hb_000689_050 Hb_004994_330 Hb_004994_330 Hb_022693_110--Hb_004994_330 Hb_004330_020 Hb_004330_020 Hb_050847_040--Hb_004330_020 Hb_001439_210 Hb_001439_210 Hb_050847_040--Hb_001439_210 Hb_050847_040--Hb_004545_080 Hb_001488_290 Hb_001488_290 Hb_050847_040--Hb_001488_290 Hb_003894_060 Hb_003894_060 Hb_050847_040--Hb_003894_060 Hb_000032_410 Hb_000032_410 Hb_004545_080--Hb_000032_410 Hb_000527_080 Hb_000527_080 Hb_004545_080--Hb_000527_080 Hb_003050_360 Hb_003050_360 Hb_004545_080--Hb_003050_360 Hb_004545_080--Hb_002942_140 Hb_004545_080--Hb_000689_050 Hb_003175_070 Hb_003175_070 Hb_004545_080--Hb_003175_070 Hb_000207_350 Hb_000207_350 Hb_001104_150--Hb_000207_350 Hb_001775_120 Hb_001775_120 Hb_001104_150--Hb_001775_120 Hb_005568_020 Hb_005568_020 Hb_001104_150--Hb_005568_020 Hb_005730_110 Hb_005730_110 Hb_001104_150--Hb_005730_110 Hb_022092_110 Hb_022092_110 Hb_001104_150--Hb_022092_110 Hb_004218_200 Hb_004218_200 Hb_001104_150--Hb_004218_200 Hb_000689_050--Hb_003050_360 Hb_005074_040 Hb_005074_040 Hb_000689_050--Hb_005074_040 Hb_014497_010 Hb_014497_010 Hb_000689_050--Hb_014497_010 Hb_000996_080 Hb_000996_080 Hb_000689_050--Hb_000996_080 Hb_006120_060 Hb_006120_060 Hb_000689_050--Hb_006120_060 Hb_002942_140--Hb_003050_360 Hb_000230_530 Hb_000230_530 Hb_002942_140--Hb_000230_530 Hb_002942_140--Hb_003175_070 Hb_112064_010 Hb_112064_010 Hb_002942_140--Hb_112064_010 Hb_010632_020 Hb_010632_020 Hb_002942_140--Hb_010632_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.27107 5.10814 30.6435 30.5991 3.53913 3.17206
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.978852 0.770277 1.74446 15.1378 21.6795

CAGE analysis