Hb_000203_070

Information

Type -
Description -
Location Contig203: 86557-90004
Sequence    

Annotation

kegg
ID pop:POPTR_0011s07290g
description POPTRDRAFT_568706; hypothetical protein
nr
ID XP_012091781.1
description PREDICTED: uncharacterized protein LOC105649674 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JBF4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21573 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20791: 86583-88951
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000203_070 0.0 - - PREDICTED: uncharacterized protein LOC105649674 [Jatropha curcas]
2 Hb_000776_040 0.1179050523 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 6 isoform X3 [Jatropha curcas]
3 Hb_001178_090 0.1309762507 - - Monodehydroascorbate reductase family protein [Populus trichocarpa]
4 Hb_034507_060 0.1325565997 - - PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Citrus sinensis]
5 Hb_005333_080 0.1351468423 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000085_380 0.1353754141 - - conserved hypothetical protein [Ricinus communis]
7 Hb_012760_090 0.1359441918 - - Aspartic proteinase-like protein 1 [Morus notabilis]
8 Hb_005485_070 0.1402780801 - - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative [Ricinus communis]
9 Hb_002685_160 0.1418088894 - - leucine-rich repeat protein, putative [Ricinus communis]
10 Hb_003929_190 0.1434937419 - - PREDICTED: probable receptor-like protein kinase At5g18500 [Jatropha curcas]
11 Hb_000834_180 0.1436778985 - - PREDICTED: kinesin-13A-like isoform X1 [Jatropha curcas]
12 Hb_001221_390 0.1445256915 - - Phospholipase C 4 precursor, putative [Ricinus communis]
13 Hb_000685_020 0.146721011 - - PREDICTED: long chain acyl-CoA synthetase 4-like [Jatropha curcas]
14 Hb_005839_030 0.1473721649 - - PREDICTED: potassium transporter 2 [Jatropha curcas]
15 Hb_012395_050 0.1504832678 - - PREDICTED: uncharacterized protein LOC105632180 [Jatropha curcas]
16 Hb_083493_010 0.1523826864 - - Disease resistance protein RPS5, putative [Ricinus communis]
17 Hb_073808_010 0.1550197351 desease resistance Gene Name: DUF594 ATP binding protein, putative [Ricinus communis]
18 Hb_000116_240 0.1570356561 transcription factor TF Family: HB homeobox-leucine zipper family protein [Populus trichocarpa]
19 Hb_000318_170 0.1574415794 - - N-acetyl-gamma-glutamyl-phosphate reductase, putative [Ricinus communis]
20 Hb_005694_180 0.1592027199 - - PREDICTED: cytochrome b5 [Jatropha curcas]

Gene co-expression network

sample Hb_000203_070 Hb_000203_070 Hb_000776_040 Hb_000776_040 Hb_000203_070--Hb_000776_040 Hb_001178_090 Hb_001178_090 Hb_000203_070--Hb_001178_090 Hb_034507_060 Hb_034507_060 Hb_000203_070--Hb_034507_060 Hb_005333_080 Hb_005333_080 Hb_000203_070--Hb_005333_080 Hb_000085_380 Hb_000085_380 Hb_000203_070--Hb_000085_380 Hb_012760_090 Hb_012760_090 Hb_000203_070--Hb_012760_090 Hb_027380_150 Hb_027380_150 Hb_000776_040--Hb_027380_150 Hb_000791_050 Hb_000791_050 Hb_000776_040--Hb_000791_050 Hb_003929_190 Hb_003929_190 Hb_000776_040--Hb_003929_190 Hb_003540_120 Hb_003540_120 Hb_000776_040--Hb_003540_120 Hb_000834_180 Hb_000834_180 Hb_000776_040--Hb_000834_180 Hb_179960_010 Hb_179960_010 Hb_001178_090--Hb_179960_010 Hb_000032_430 Hb_000032_430 Hb_001178_090--Hb_000032_430 Hb_012395_050 Hb_012395_050 Hb_001178_090--Hb_012395_050 Hb_003050_100 Hb_003050_100 Hb_001178_090--Hb_003050_100 Hb_002592_050 Hb_002592_050 Hb_001178_090--Hb_002592_050 Hb_023226_030 Hb_023226_030 Hb_034507_060--Hb_023226_030 Hb_034507_060--Hb_012760_090 Hb_005694_180 Hb_005694_180 Hb_034507_060--Hb_005694_180 Hb_003710_020 Hb_003710_020 Hb_034507_060--Hb_003710_020 Hb_004218_130 Hb_004218_130 Hb_034507_060--Hb_004218_130 Hb_010050_020 Hb_010050_020 Hb_034507_060--Hb_010050_020 Hb_010672_050 Hb_010672_050 Hb_005333_080--Hb_010672_050 Hb_005333_080--Hb_012760_090 Hb_158092_040 Hb_158092_040 Hb_005333_080--Hb_158092_040 Hb_008695_150 Hb_008695_150 Hb_005333_080--Hb_008695_150 Hb_000116_240 Hb_000116_240 Hb_005333_080--Hb_000116_240 Hb_001019_160 Hb_001019_160 Hb_005333_080--Hb_001019_160 Hb_002833_020 Hb_002833_020 Hb_000085_380--Hb_002833_020 Hb_000318_170 Hb_000318_170 Hb_000085_380--Hb_000318_170 Hb_001221_390 Hb_001221_390 Hb_000085_380--Hb_001221_390 Hb_001008_110 Hb_001008_110 Hb_000085_380--Hb_001008_110 Hb_033234_010 Hb_033234_010 Hb_000085_380--Hb_033234_010 Hb_003106_110 Hb_003106_110 Hb_000085_380--Hb_003106_110 Hb_002641_160 Hb_002641_160 Hb_012760_090--Hb_002641_160 Hb_012760_090--Hb_010050_020 Hb_012760_090--Hb_004218_130 Hb_012760_090--Hb_000318_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.9032 4.67559 8.6156 14.5746 0.434979 0.966496
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0543505 0.0570232 0.869238 7.93245 4.93666

CAGE analysis