Hb_000203_240

Information

Type -
Description -
Location Contig203: 273834-275738
Sequence    

Annotation

kegg
ID rcu:RCOM_1014860
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.10.1)
nr
ID XP_002522569.1
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
swissprot
ID O22808
description Protein LYK5 OS=Arabidopsis thaliana GN=LYK5 PE=2 SV=1
trembl
ID B9S9A0
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative OS=Ricinus communis GN=RCOM_1014860 PE=4 SV=1
Gene Ontology
ID GO:0004714
description lrr receptor-like serine threonine-protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000203_240 0.0 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
2 Hb_005433_050 0.044060471 - - PREDICTED: uncharacterized protein At1g66480-like [Populus euphratica]
3 Hb_002944_020 0.0713702217 transcription factor TF Family: bZIP hypothetical protein POPTR_0006s05770g, partial [Populus trichocarpa]
4 Hb_000229_080 0.0734346741 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
5 Hb_106528_020 0.0754637071 - - Cationic peroxidase 2 precursor [Theobroma cacao]
6 Hb_004190_030 0.0788235871 - - unnamed protein product [Vitis vinifera]
7 Hb_000563_060 0.0794766345 - - PREDICTED: uncharacterized protein LOC100306381 isoform X1 [Glycine max]
8 Hb_010358_010 0.0803119305 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
9 Hb_012506_080 0.0803303787 - - amino acid transporter, putative [Ricinus communis]
10 Hb_004267_050 0.0805061889 - - hypothetical protein JCGZ_04357 [Jatropha curcas]
11 Hb_003119_110 0.0815442653 - - PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Jatropha curcas]
12 Hb_009780_060 0.0830624862 rubber biosynthesis Gene Name: Geranyl geranyl diphosphate synthase geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
13 Hb_187247_010 0.0832149673 - - PREDICTED: cytochrome P450 86B1-like [Jatropha curcas]
14 Hb_061590_010 0.0833673273 - - hypothetical protein JCGZ_23475 [Jatropha curcas]
15 Hb_005726_030 0.0834911846 - - hypothetical protein CISIN_1g020511mg [Citrus sinensis]
16 Hb_001140_330 0.084371627 - - PREDICTED: uncharacterized protein LOC105142675 [Populus euphratica]
17 Hb_000500_190 0.0845942077 - - hypothetical protein JCGZ_21655 [Jatropha curcas]
18 Hb_007337_010 0.0847356039 - - PREDICTED: putative receptor protein kinase ZmPK1 [Jatropha curcas]
19 Hb_143766_040 0.0850350174 - - PREDICTED: probable caffeoyl-CoA O-methyltransferase At4g26220 [Jatropha curcas]
20 Hb_004981_020 0.085707868 - - PREDICTED: uncharacterized protein LOC103706119 [Phoenix dactylifera]

Gene co-expression network

sample Hb_000203_240 Hb_000203_240 Hb_005433_050 Hb_005433_050 Hb_000203_240--Hb_005433_050 Hb_002944_020 Hb_002944_020 Hb_000203_240--Hb_002944_020 Hb_000229_080 Hb_000229_080 Hb_000203_240--Hb_000229_080 Hb_106528_020 Hb_106528_020 Hb_000203_240--Hb_106528_020 Hb_004190_030 Hb_004190_030 Hb_000203_240--Hb_004190_030 Hb_000563_060 Hb_000563_060 Hb_000203_240--Hb_000563_060 Hb_005433_050--Hb_106528_020 Hb_010358_010 Hb_010358_010 Hb_005433_050--Hb_010358_010 Hb_005433_050--Hb_000563_060 Hb_005433_050--Hb_002944_020 Hb_005433_050--Hb_000229_080 Hb_002944_020--Hb_010358_010 Hb_153208_010 Hb_153208_010 Hb_002944_020--Hb_153208_010 Hb_002944_020--Hb_106528_020 Hb_000692_270 Hb_000692_270 Hb_002944_020--Hb_000692_270 Hb_003188_020 Hb_003188_020 Hb_002944_020--Hb_003188_020 Hb_014034_020 Hb_014034_020 Hb_002944_020--Hb_014034_020 Hb_000500_190 Hb_000500_190 Hb_000229_080--Hb_000500_190 Hb_000229_080--Hb_014034_020 Hb_004254_070 Hb_004254_070 Hb_000229_080--Hb_004254_070 Hb_000229_080--Hb_000563_060 Hb_000229_080--Hb_003188_020 Hb_000446_100 Hb_000446_100 Hb_000229_080--Hb_000446_100 Hb_038238_010 Hb_038238_010 Hb_106528_020--Hb_038238_010 Hb_005726_030 Hb_005726_030 Hb_106528_020--Hb_005726_030 Hb_061590_010 Hb_061590_010 Hb_106528_020--Hb_061590_010 Hb_187247_010 Hb_187247_010 Hb_106528_020--Hb_187247_010 Hb_106528_020--Hb_010358_010 Hb_106528_020--Hb_153208_010 Hb_004190_030--Hb_000563_060 Hb_003119_110 Hb_003119_110 Hb_004190_030--Hb_003119_110 Hb_001140_330 Hb_001140_330 Hb_004190_030--Hb_001140_330 Hb_004267_050 Hb_004267_050 Hb_004190_030--Hb_004267_050 Hb_039363_010 Hb_039363_010 Hb_004190_030--Hb_039363_010 Hb_004190_030--Hb_010358_010 Hb_002835_020 Hb_002835_020 Hb_000563_060--Hb_002835_020 Hb_000563_060--Hb_001140_330 Hb_000563_060--Hb_039363_010 Hb_000563_060--Hb_003119_110 Hb_000563_060--Hb_153208_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.239031 0.0487793 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0238237 0.0187448 0 9.16966 0.0395562

CAGE analysis