Hb_000204_210

Information

Type -
Description -
Location Contig204: 301555-312739
Sequence    

Annotation

kegg
ID rcu:RCOM_0804080
description hypothetical protein
nr
ID XP_012078606.1
description PREDICTED: uncharacterized protein LOC105639237 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KJ50
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13200 PE=4 SV=1
Gene Ontology
ID GO:0035194
description enhancer of polycomb-like transcription factor isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20908: 301564-310834 , PASA_asmbl_20909: 301564-302244
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000204_210 0.0 - - PREDICTED: uncharacterized protein LOC105639237 [Jatropha curcas]
2 Hb_001584_150 0.0660288631 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405 [Jatropha curcas]
3 Hb_008500_010 0.076215393 - - PREDICTED: pentatricopeptide repeat-containing protein At2g17210 [Jatropha curcas]
4 Hb_002678_020 0.0788610441 - - PREDICTED: pentatricopeptide repeat-containing protein At2g21090-like [Jatropha curcas]
5 Hb_001507_020 0.0797733667 - - PREDICTED: pentatricopeptide repeat-containing protein At4g14170 [Jatropha curcas]
6 Hb_001141_390 0.0830116129 - - PREDICTED: uncharacterized protein LOC105631983 [Jatropha curcas]
7 Hb_009486_200 0.0900569353 - - PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like [Jatropha curcas]
8 Hb_048219_010 0.0904052424 - - coronatine-insensitive 1 [Hevea brasiliensis]
9 Hb_010172_090 0.0917269456 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
10 Hb_000062_250 0.0951645182 - - PREDICTED: F-box protein SKIP14 [Jatropha curcas]
11 Hb_006316_040 0.0952515176 - - PREDICTED: pentatricopeptide repeat-containing protein At5g16860 [Jatropha curcas]
12 Hb_004374_070 0.0954929461 - - PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Jatropha curcas]
13 Hb_000107_420 0.0963004531 - - PREDICTED: pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Jatropha curcas]
14 Hb_011716_030 0.0963588176 - - PREDICTED: putative pentatricopeptide repeat-containing protein At3g23330 [Populus euphratica]
15 Hb_007483_100 0.0964628649 - - hypothetical protein POPTR_0001s34330g [Populus trichocarpa]
16 Hb_002311_040 0.0966677308 - - hypothetical protein JCGZ_18966 [Jatropha curcas]
17 Hb_000140_230 0.0972926254 - - PREDICTED: pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Jatropha curcas]
18 Hb_000270_670 0.1019320933 transcription factor TF Family: IWS1 PREDICTED: uncharacterized protein LOC105640420 [Jatropha curcas]
19 Hb_000206_240 0.1021058247 - - conserved hypothetical protein [Ricinus communis]
20 Hb_007757_110 0.102224535 - - PREDICTED: E3 ubiquitin-protein ligase UPL5 [Jatropha curcas]

Gene co-expression network

sample Hb_000204_210 Hb_000204_210 Hb_001584_150 Hb_001584_150 Hb_000204_210--Hb_001584_150 Hb_008500_010 Hb_008500_010 Hb_000204_210--Hb_008500_010 Hb_002678_020 Hb_002678_020 Hb_000204_210--Hb_002678_020 Hb_001507_020 Hb_001507_020 Hb_000204_210--Hb_001507_020 Hb_001141_390 Hb_001141_390 Hb_000204_210--Hb_001141_390 Hb_009486_200 Hb_009486_200 Hb_000204_210--Hb_009486_200 Hb_001584_150--Hb_008500_010 Hb_007757_110 Hb_007757_110 Hb_001584_150--Hb_007757_110 Hb_000062_250 Hb_000062_250 Hb_001584_150--Hb_000062_250 Hb_001584_150--Hb_001507_020 Hb_002311_040 Hb_002311_040 Hb_001584_150--Hb_002311_040 Hb_006316_040 Hb_006316_040 Hb_008500_010--Hb_006316_040 Hb_012656_030 Hb_012656_030 Hb_008500_010--Hb_012656_030 Hb_004724_060 Hb_004724_060 Hb_008500_010--Hb_004724_060 Hb_015807_070 Hb_015807_070 Hb_008500_010--Hb_015807_070 Hb_008500_010--Hb_002311_040 Hb_002678_020--Hb_001507_020 Hb_007483_100 Hb_007483_100 Hb_002678_020--Hb_007483_100 Hb_000427_050 Hb_000427_050 Hb_002678_020--Hb_000427_050 Hb_000000_250 Hb_000000_250 Hb_002678_020--Hb_000000_250 Hb_002678_020--Hb_002311_040 Hb_001975_160 Hb_001975_160 Hb_001507_020--Hb_001975_160 Hb_004684_010 Hb_004684_010 Hb_001507_020--Hb_004684_010 Hb_003464_060 Hb_003464_060 Hb_001507_020--Hb_003464_060 Hb_001507_020--Hb_007757_110 Hb_000680_050 Hb_000680_050 Hb_001141_390--Hb_000680_050 Hb_002374_310 Hb_002374_310 Hb_001141_390--Hb_002374_310 Hb_048219_010 Hb_048219_010 Hb_001141_390--Hb_048219_010 Hb_005015_070 Hb_005015_070 Hb_001141_390--Hb_005015_070 Hb_001141_390--Hb_001584_150 Hb_009486_200--Hb_002311_040 Hb_009486_200--Hb_008500_010 Hb_004143_130 Hb_004143_130 Hb_009486_200--Hb_004143_130 Hb_009486_200--Hb_012656_030 Hb_009486_200--Hb_002678_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.321 19.5133 4.01192 7.57396 12.3212 21.8652
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.85976 12.8126 26.169 8.02842 10.1924

CAGE analysis