Hb_000205_220

Information

Type -
Description -
Location Contig205: 288384-289511
Sequence    

Annotation

kegg
ID rcu:RCOM_0609800
description hypothetical protein
nr
ID XP_012089367.1
description PREDICTED: uncharacterized protein LOC105647760 [Jatropha curcas]
swissprot
ID Q58FX0
description BON1-associated protein 2 OS=Arabidopsis thaliana GN=BAP2 PE=1 SV=1
trembl
ID A0A067JUT5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23563 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000205_220 0.0 - - PREDICTED: uncharacterized protein LOC105647760 [Jatropha curcas]
2 Hb_052764_010 0.0512642386 - - hypothetical protein POPTR_0011s04320g [Populus trichocarpa]
3 Hb_010091_040 0.079588528 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
4 Hb_007858_030 0.0977270221 - - retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa Japonica Group]
5 Hb_063869_010 0.1145218917 - - JHL22C18.10 [Jatropha curcas]
6 Hb_042141_010 0.1435647657 - - -
7 Hb_002284_040 0.1570433035 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
8 Hb_137701_020 0.1896779132 - - putative protein kinase [Oryza sativa Japonica Group]
9 Hb_000059_160 0.1919956509 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
10 Hb_000243_310 0.2036658874 - - lactoylglutathione lyase, putative [Ricinus communis]
11 Hb_011344_150 0.2060300927 - - polyprotein [Citrus endogenous pararetrovirus]
12 Hb_003867_030 0.2102975575 - - -
13 Hb_000002_280 0.2109251637 - - PREDICTED: two-pore potassium channel 1 [Jatropha curcas]
14 Hb_006873_030 0.2212743796 - - receptor serine/threonine kinase, putative [Ricinus communis]
15 Hb_007507_030 0.2222867985 - - polyprotein [Citrus endogenous pararetrovirus]
16 Hb_002025_240 0.2258617688 - - -
17 Hb_004880_120 0.2259145596 - - PREDICTED: calcium-binding protein PBP1 [Jatropha curcas]
18 Hb_091913_010 0.2304954603 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
19 Hb_004007_210 0.2344975559 transcription factor TF Family: GNAT N-acetyltransferase, putative [Ricinus communis]
20 Hb_006040_080 0.2399772423 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000205_220 Hb_000205_220 Hb_052764_010 Hb_052764_010 Hb_000205_220--Hb_052764_010 Hb_010091_040 Hb_010091_040 Hb_000205_220--Hb_010091_040 Hb_007858_030 Hb_007858_030 Hb_000205_220--Hb_007858_030 Hb_063869_010 Hb_063869_010 Hb_000205_220--Hb_063869_010 Hb_042141_010 Hb_042141_010 Hb_000205_220--Hb_042141_010 Hb_002284_040 Hb_002284_040 Hb_000205_220--Hb_002284_040 Hb_052764_010--Hb_010091_040 Hb_052764_010--Hb_042141_010 Hb_052764_010--Hb_063869_010 Hb_052764_010--Hb_007858_030 Hb_052764_010--Hb_002284_040 Hb_010091_040--Hb_002284_040 Hb_010091_040--Hb_007858_030 Hb_000002_280 Hb_000002_280 Hb_010091_040--Hb_000002_280 Hb_010091_040--Hb_042141_010 Hb_000059_160 Hb_000059_160 Hb_007858_030--Hb_000059_160 Hb_007858_030--Hb_002284_040 Hb_091913_010 Hb_091913_010 Hb_007858_030--Hb_091913_010 Hb_137701_020 Hb_137701_020 Hb_063869_010--Hb_137701_020 Hb_063869_010--Hb_042141_010 Hb_007507_030 Hb_007507_030 Hb_063869_010--Hb_007507_030 Hb_004880_120 Hb_004880_120 Hb_063869_010--Hb_004880_120 Hb_042141_010--Hb_007507_030 Hb_101778_010 Hb_101778_010 Hb_042141_010--Hb_101778_010 Hb_042141_010--Hb_137701_020 Hb_000892_040 Hb_000892_040 Hb_002284_040--Hb_000892_040 Hb_080873_010 Hb_080873_010 Hb_002284_040--Hb_080873_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.165438 0.0301903 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0708951

CAGE analysis