Hb_000207_060

Information

Type -
Description -
Location Contig207: 96830-97453
Sequence    

Annotation

kegg
ID pop:POPTR_0019s11250g
description POPTRDRAFT_665754; hypothetical protein
nr
ID XP_012072606.1
description PREDICTED: uncharacterized protein LOC105634368 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L173
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06356 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21306: 96686-97249
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000207_060 0.0 - - PREDICTED: uncharacterized protein LOC105634368 [Jatropha curcas]
2 Hb_003090_220 0.0485959953 - - PREDICTED: copper transporter 4 [Jatropha curcas]
3 Hb_001818_010 0.0903688719 - - Disease resistance response protein, putative [Ricinus communis]
4 Hb_004705_060 0.0906006177 - - PREDICTED: serine carboxypeptidase-like 45 [Jatropha curcas]
5 Hb_009367_070 0.0910128372 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
6 Hb_000331_630 0.0972336118 - - hypothetical protein B456_008G203900 [Gossypium raimondii]
7 Hb_000408_060 0.0996090267 - - hypothetical protein POPTR_0018s11360g [Populus trichocarpa]
8 Hb_003680_240 0.0999701864 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Jatropha curcas]
9 Hb_051212_020 0.1008377228 - - PREDICTED: 24-methylenesterol C-methyltransferase 2-like [Jatropha curcas]
10 Hb_140627_040 0.1014081809 - - PREDICTED: vesicle-associated protein 4-1-like [Jatropha curcas]
11 Hb_000789_160 0.1037287685 - - PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat extensin-like protein 4 [Jatropha curcas]
12 Hb_001789_230 0.10756425 - - conserved hypothetical protein [Ricinus communis]
13 Hb_002902_060 0.1087232989 - - PREDICTED: uncharacterized protein LOC105639824 [Jatropha curcas]
14 Hb_001635_140 0.1093691771 - - protein with unknown function [Ricinus communis]
15 Hb_034713_010 0.1123716101 - - PREDICTED: uncharacterized protein LOC105133378 [Populus euphratica]
16 Hb_003849_170 0.1135796871 - - hypothetical protein JCGZ_17850 [Jatropha curcas]
17 Hb_000813_020 0.1138682701 - - PREDICTED: metacaspase-3-like [Jatropha curcas]
18 Hb_015292_020 0.1149358244 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
19 Hb_170077_020 0.1152917796 - - PREDICTED: probable serine incorporator [Jatropha curcas]
20 Hb_005648_020 0.1174540149 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [Jatropha curcas]

Gene co-expression network

sample Hb_000207_060 Hb_000207_060 Hb_003090_220 Hb_003090_220 Hb_000207_060--Hb_003090_220 Hb_001818_010 Hb_001818_010 Hb_000207_060--Hb_001818_010 Hb_004705_060 Hb_004705_060 Hb_000207_060--Hb_004705_060 Hb_009367_070 Hb_009367_070 Hb_000207_060--Hb_009367_070 Hb_000331_630 Hb_000331_630 Hb_000207_060--Hb_000331_630 Hb_000408_060 Hb_000408_060 Hb_000207_060--Hb_000408_060 Hb_001789_230 Hb_001789_230 Hb_003090_220--Hb_001789_230 Hb_003090_220--Hb_001818_010 Hb_003090_220--Hb_000408_060 Hb_005648_020 Hb_005648_020 Hb_003090_220--Hb_005648_020 Hb_170077_020 Hb_170077_020 Hb_003090_220--Hb_170077_020 Hb_002260_140 Hb_002260_140 Hb_001818_010--Hb_002260_140 Hb_051212_020 Hb_051212_020 Hb_001818_010--Hb_051212_020 Hb_009079_020 Hb_009079_020 Hb_001818_010--Hb_009079_020 Hb_000866_130 Hb_000866_130 Hb_001818_010--Hb_000866_130 Hb_112950_010 Hb_112950_010 Hb_001818_010--Hb_112950_010 Hb_135757_030 Hb_135757_030 Hb_001818_010--Hb_135757_030 Hb_004705_060--Hb_009367_070 Hb_085829_010 Hb_085829_010 Hb_004705_060--Hb_085829_010 Hb_000333_140 Hb_000333_140 Hb_004705_060--Hb_000333_140 Hb_004112_080 Hb_004112_080 Hb_004705_060--Hb_004112_080 Hb_034713_010 Hb_034713_010 Hb_004705_060--Hb_034713_010 Hb_009367_070--Hb_034713_010 Hb_009367_070--Hb_004112_080 Hb_140627_040 Hb_140627_040 Hb_009367_070--Hb_140627_040 Hb_011628_010 Hb_011628_010 Hb_009367_070--Hb_011628_010 Hb_000614_300 Hb_000614_300 Hb_000331_630--Hb_000614_300 Hb_002263_050 Hb_002263_050 Hb_000331_630--Hb_002263_050 Hb_000789_160 Hb_000789_160 Hb_000331_630--Hb_000789_160 Hb_001357_110 Hb_001357_110 Hb_000331_630--Hb_001357_110 Hb_003680_240 Hb_003680_240 Hb_000331_630--Hb_003680_240 Hb_002014_130 Hb_002014_130 Hb_000408_060--Hb_002014_130 Hb_000408_060--Hb_001818_010 Hb_006153_140 Hb_006153_140 Hb_000408_060--Hb_006153_140 Hb_000408_060--Hb_003680_240 Hb_000408_060--Hb_000866_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.243574 2.39406 8.75148 0.0413564 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.459745 1.31261

CAGE analysis