Hb_000207_200

Information

Type -
Description -
Location Contig207: 295344-300020
Sequence    

Annotation

kegg
ID rcu:RCOM_0785090
description histidinol-phosphate aminotransferase, putative (EC:2.6.1.9)
nr
ID XP_012069876.1
description PREDICTED: histidinol-phosphate aminotransferase, chloroplastic-like [Jatropha curcas]
swissprot
ID Q9FEW2
description Histidinol-phosphate aminotransferase, chloroplastic OS=Nicotiana plumbaginifolia GN=HPA PE=1 SV=1
trembl
ID B9SB59
description Histidinol-phosphate aminotransferase, putative OS=Ricinus communis GN=RCOM_0785090 PE=3 SV=1
Gene Ontology
ID GO:0004400
description histidinol-phosphate chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21327: 295382-299612
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000207_200 0.0 - - PREDICTED: histidinol-phosphate aminotransferase, chloroplastic-like [Jatropha curcas]
2 Hb_003470_040 0.0560166017 - - PREDICTED: 2-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial [Jatropha curcas]
3 Hb_002909_040 0.0593799499 desease resistance Gene Name: AAA PREDICTED: 26S protease regulatory subunit 6B homolog [Jatropha curcas]
4 Hb_000089_210 0.060623336 - - unknown [Medicago truncatula]
5 Hb_033642_120 0.0641819968 - - PREDICTED: nucleolar GTP-binding protein 2 [Vitis vinifera]
6 Hb_029695_080 0.0676013775 - - PREDICTED: NAD-dependent protein deacetylase SRT1 [Prunus mume]
7 Hb_002110_160 0.0677538451 - - PREDICTED: phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic [Jatropha curcas]
8 Hb_000282_090 0.070479032 - - PREDICTED: serine/threonine-protein kinase EDR1 [Jatropha curcas]
9 Hb_001005_020 0.0725934945 - - PREDICTED: uncharacterized protein LOC105630212 [Jatropha curcas]
10 Hb_000975_210 0.0740673924 - - PREDICTED: THO complex subunit 4A [Jatropha curcas]
11 Hb_000868_120 0.0748230787 - - PREDICTED: suppressor of mec-8 and unc-52 protein homolog 2 [Jatropha curcas]
12 Hb_000085_170 0.0772180228 - - PREDICTED: transcription initiation factor TFIID subunit 6-like isoform X1 [Jatropha curcas]
13 Hb_005649_100 0.0781387608 - - Ras-GTPase-activating protein-binding protein, putative [Ricinus communis]
14 Hb_009449_060 0.0785459111 - - PREDICTED: ubiquitin-like-specific protease 1D isoform X2 [Jatropha curcas]
15 Hb_010287_020 0.0825793435 - - CCR4-NOT transcription complex subunit, putative [Ricinus communis]
16 Hb_004096_160 0.0848880074 - - PREDICTED: T-complex protein 1 subunit zeta 1 [Jatropha curcas]
17 Hb_000102_050 0.0857213384 transcription factor TF Family: RB conserved hypothetical protein [Ricinus communis]
18 Hb_002326_110 0.0867891827 - - PREDICTED: uncharacterized protein LOC103320920 [Prunus mume]
19 Hb_000661_120 0.0870898521 - - cap binding protein, putative [Ricinus communis]
20 Hb_008387_010 0.0875053662 - - SMAD/FHA domain-containing protein isoform 3 [Theobroma cacao]

Gene co-expression network

sample Hb_000207_200 Hb_000207_200 Hb_003470_040 Hb_003470_040 Hb_000207_200--Hb_003470_040 Hb_002909_040 Hb_002909_040 Hb_000207_200--Hb_002909_040 Hb_000089_210 Hb_000089_210 Hb_000207_200--Hb_000089_210 Hb_033642_120 Hb_033642_120 Hb_000207_200--Hb_033642_120 Hb_029695_080 Hb_029695_080 Hb_000207_200--Hb_029695_080 Hb_002110_160 Hb_002110_160 Hb_000207_200--Hb_002110_160 Hb_003470_040--Hb_029695_080 Hb_003470_040--Hb_033642_120 Hb_003687_120 Hb_003687_120 Hb_003470_040--Hb_003687_120 Hb_003470_040--Hb_000089_210 Hb_003470_040--Hb_002110_160 Hb_004096_160 Hb_004096_160 Hb_002909_040--Hb_004096_160 Hb_000513_090 Hb_000513_090 Hb_002909_040--Hb_000513_090 Hb_002909_040--Hb_000089_210 Hb_009449_060 Hb_009449_060 Hb_002909_040--Hb_009449_060 Hb_002326_110 Hb_002326_110 Hb_002909_040--Hb_002326_110 Hb_001699_010 Hb_001699_010 Hb_000089_210--Hb_001699_010 Hb_005977_030 Hb_005977_030 Hb_000089_210--Hb_005977_030 Hb_000089_210--Hb_004096_160 Hb_003506_030 Hb_003506_030 Hb_000089_210--Hb_003506_030 Hb_000868_120 Hb_000868_120 Hb_033642_120--Hb_000868_120 Hb_001439_220 Hb_001439_220 Hb_033642_120--Hb_001439_220 Hb_000661_120 Hb_000661_120 Hb_033642_120--Hb_000661_120 Hb_010287_020 Hb_010287_020 Hb_033642_120--Hb_010287_020 Hb_029695_080--Hb_033642_120 Hb_029695_080--Hb_002909_040 Hb_001221_440 Hb_001221_440 Hb_029695_080--Hb_001221_440 Hb_029695_080--Hb_003506_030 Hb_000282_090 Hb_000282_090 Hb_002110_160--Hb_000282_090 Hb_010775_030 Hb_010775_030 Hb_002110_160--Hb_010775_030 Hb_002110_160--Hb_010287_020 Hb_004870_050 Hb_004870_050 Hb_002110_160--Hb_004870_050 Hb_002110_160--Hb_000868_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.8633 17.5196 27.7207 12.5519 11.5154 9.49269
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.97625 10.3025 7.50686 12.2728 12.0817

CAGE analysis