Hb_000209_110

Information

Type -
Description -
Location Contig209: 238614-242282
Sequence    

Annotation

kegg
ID pop:POPTR_0011s17240g
description hypothetical protein
nr
ID XP_012081858.1
description PREDICTED: receptor-like protein kinase BRI1-like 3 [Jatropha curcas]
swissprot
ID Q9ZWC8
description Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1
trembl
ID A0A067KCE7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19227 PE=4 SV=1
Gene Ontology
ID GO:0016021
description receptor-like protein kinase bri1-like 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21621: 241941-242369
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000209_110 0.0 - - PREDICTED: receptor-like protein kinase BRI1-like 3 [Jatropha curcas]
2 Hb_000544_100 0.1684668988 - - hypothetical protein JCGZ_03636 [Jatropha curcas]
3 Hb_003073_180 0.1711450568 - - hypothetical protein JCGZ_20198 [Jatropha curcas]
4 Hb_006586_030 0.2002722904 - - PREDICTED: transcription factor LHW isoform X1 [Jatropha curcas]
5 Hb_000093_150 0.2029997067 - - 6-phosphogluconolactonase, putative [Ricinus communis]
6 Hb_004462_010 0.2044662747 - - PREDICTED: primary amine oxidase-like [Jatropha curcas]
7 Hb_002407_080 0.2063507563 - - hypothetical protein JCGZ_00752 [Jatropha curcas]
8 Hb_039145_010 0.2144027836 - - eukaryotic translation initiation factor 2c, putative [Ricinus communis]
9 Hb_002477_220 0.2161775373 - - hypothetical protein POPTR_0017s06650g [Populus trichocarpa]
10 Hb_001524_090 0.2188567594 - - PREDICTED: uncharacterized protein LOC105113929 [Populus euphratica]
11 Hb_001587_010 0.2199711472 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH25-like [Jatropha curcas]
12 Hb_182680_010 0.2213338334 - - hypothetical protein JCGZ_07831 [Jatropha curcas]
13 Hb_001104_240 0.228408253 transcription factor TF Family: Trihelix transcription factor, putative [Ricinus communis]
14 Hb_004143_120 0.2294769788 - - PREDICTED: serine/threonine-protein kinase CTR1 [Jatropha curcas]
15 Hb_001089_040 0.2312526702 transcription factor TF Family: bHLH DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
16 Hb_006275_010 0.2353608509 - - PREDICTED: ribulose bisphosphate carboxylase small chain clone 512-like [Jatropha curcas]
17 Hb_007943_160 0.2398678457 - - PREDICTED: aspartate aminotransferase, cytoplasmic [Jatropha curcas]
18 Hb_000343_100 0.2420542616 - - PREDICTED: regulator of telomere elongation helicase 1 homolog [Jatropha curcas]
19 Hb_001507_100 0.2427369329 - - cytochrome P450, putative [Ricinus communis]
20 Hb_068804_020 0.2427981218 - - hypothetical protein AMTR_s00046p00231970 [Amborella trichopoda]

Gene co-expression network

sample Hb_000209_110 Hb_000209_110 Hb_000544_100 Hb_000544_100 Hb_000209_110--Hb_000544_100 Hb_003073_180 Hb_003073_180 Hb_000209_110--Hb_003073_180 Hb_006586_030 Hb_006586_030 Hb_000209_110--Hb_006586_030 Hb_000093_150 Hb_000093_150 Hb_000209_110--Hb_000093_150 Hb_004462_010 Hb_004462_010 Hb_000209_110--Hb_004462_010 Hb_002407_080 Hb_002407_080 Hb_000209_110--Hb_002407_080 Hb_000544_100--Hb_004462_010 Hb_004724_120 Hb_004724_120 Hb_000544_100--Hb_004724_120 Hb_002477_220 Hb_002477_220 Hb_000544_100--Hb_002477_220 Hb_001636_020 Hb_001636_020 Hb_000544_100--Hb_001636_020 Hb_182680_010 Hb_182680_010 Hb_000544_100--Hb_182680_010 Hb_003073_180--Hb_002407_080 Hb_000805_320 Hb_000805_320 Hb_003073_180--Hb_000805_320 Hb_001258_060 Hb_001258_060 Hb_003073_180--Hb_001258_060 Hb_080147_100 Hb_080147_100 Hb_003073_180--Hb_080147_100 Hb_003073_180--Hb_006586_030 Hb_001104_240 Hb_001104_240 Hb_006586_030--Hb_001104_240 Hb_002827_020 Hb_002827_020 Hb_006586_030--Hb_002827_020 Hb_001524_090 Hb_001524_090 Hb_006586_030--Hb_001524_090 Hb_000086_660 Hb_000086_660 Hb_006586_030--Hb_000086_660 Hb_001269_690 Hb_001269_690 Hb_006586_030--Hb_001269_690 Hb_000200_280 Hb_000200_280 Hb_006586_030--Hb_000200_280 Hb_000928_040 Hb_000928_040 Hb_000093_150--Hb_000928_040 Hb_127886_010 Hb_127886_010 Hb_000093_150--Hb_127886_010 Hb_000645_210 Hb_000645_210 Hb_000093_150--Hb_000645_210 Hb_000093_150--Hb_004462_010 Hb_003517_020 Hb_003517_020 Hb_000093_150--Hb_003517_020 Hb_002304_140 Hb_002304_140 Hb_000093_150--Hb_002304_140 Hb_004462_010--Hb_127886_010 Hb_004462_010--Hb_001524_090 Hb_004462_010--Hb_001636_020 Hb_004242_190 Hb_004242_190 Hb_002407_080--Hb_004242_190 Hb_002972_020 Hb_002972_020 Hb_002407_080--Hb_002972_020 Hb_002407_080--Hb_001258_060 Hb_000009_620 Hb_000009_620 Hb_002407_080--Hb_000009_620 Hb_005273_040 Hb_005273_040 Hb_002407_080--Hb_005273_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.38277 2.15034 0.134052 1.253 1.21537 3.0398
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.37117 1.03294 0.654748 14.4008 0.710744

CAGE analysis