Hb_000212_450

Information

Type -
Description -
Location Contig212: 455095-459503
Sequence    

Annotation

kegg
ID rcu:RCOM_1078400
description translation initiation factor, putative
nr
ID XP_012085767.1
description PREDICTED: basic leucine zipper and W2 domain-containing protein 2 [Jatropha curcas]
swissprot
ID Q2L4X1
description Basic leucine zipper and W2 domain-containing protein 2 OS=Mus musculus molossinus GN=Bzw2 PE=2 SV=1
trembl
ID A0A067K4Y3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18032 PE=4 SV=1
Gene Ontology
ID GO:0003743
description basic leucine zipper and w2 domain-containing protein 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21992: 455098-459656
cDNA
(Sanger)
(ID:Location)		 051_L10.ab1: 456957-459577

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000212_450 0.0 - - PREDICTED: basic leucine zipper and W2 domain-containing protein 2 [Jatropha curcas]
2 Hb_000060_050 0.0740678548 - - PREDICTED: uncharacterized protein LOC105649718 [Jatropha curcas]
3 Hb_000521_130 0.0753731197 - - PREDICTED: citrate synthase, mitochondrial [Jatropha curcas]
4 Hb_007416_090 0.0756801356 - - UDP-sugar transporter, putative [Ricinus communis]
5 Hb_000140_380 0.0795390961 - - PREDICTED: F-box/kelch-repeat protein At3g61590 [Jatropha curcas]
6 Hb_000173_410 0.0871846475 - - PREDICTED: BI1-like protein [Jatropha curcas]
7 Hb_000252_100 0.0878196521 - - PREDICTED: AP-1 complex subunit mu-2 [Jatropha curcas]
8 Hb_002284_230 0.094512693 - - PREDICTED: uncharacterized protein At5g43822 [Jatropha curcas]
9 Hb_000116_270 0.0948191109 - - PREDICTED: SRSF protein kinase 2-like [Jatropha curcas]
10 Hb_003697_050 0.0952300997 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 13 [Jatropha curcas]
11 Hb_001898_080 0.0961370133 - - PREDICTED: MACPF domain-containing protein At4g24290 isoform X2 [Jatropha curcas]
12 Hb_084646_010 0.0968974714 - - hypothetical protein CICLE_v10031746mg [Citrus clementina]
13 Hb_002298_030 0.0993372193 - - PREDICTED: coenzyme Q-binding protein COQ10 homolog, mitochondrial [Jatropha curcas]
14 Hb_003529_030 0.0995872576 - - Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis]
15 Hb_005306_180 0.0999485071 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial-like [Jatropha curcas]
16 Hb_000787_020 0.1001653331 - - PREDICTED: glucose-6-phosphate/phosphate translocator 1, chloroplastic isoform X1 [Jatropha curcas]
17 Hb_002631_010 0.1037535527 - - PREDICTED: V-type proton ATPase catalytic subunit A [Jatropha curcas]
18 Hb_094836_010 0.104122473 - - PREDICTED: uncharacterized protein LOC105638026 [Jatropha curcas]
19 Hb_004800_100 0.1046340467 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000505_150 0.1056756954 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Jatropha curcas]

Gene co-expression network

sample Hb_000212_450 Hb_000212_450 Hb_000060_050 Hb_000060_050 Hb_000212_450--Hb_000060_050 Hb_000521_130 Hb_000521_130 Hb_000212_450--Hb_000521_130 Hb_007416_090 Hb_007416_090 Hb_000212_450--Hb_007416_090 Hb_000140_380 Hb_000140_380 Hb_000212_450--Hb_000140_380 Hb_000173_410 Hb_000173_410 Hb_000212_450--Hb_000173_410 Hb_000252_100 Hb_000252_100 Hb_000212_450--Hb_000252_100 Hb_003305_040 Hb_003305_040 Hb_000060_050--Hb_003305_040 Hb_001489_110 Hb_001489_110 Hb_000060_050--Hb_001489_110 Hb_002660_170 Hb_002660_170 Hb_000060_050--Hb_002660_170 Hb_000060_050--Hb_000252_100 Hb_000060_050--Hb_000173_410 Hb_000521_130--Hb_000252_100 Hb_000521_130--Hb_000140_380 Hb_004800_100 Hb_004800_100 Hb_000521_130--Hb_004800_100 Hb_017131_010 Hb_017131_010 Hb_000521_130--Hb_017131_010 Hb_000521_130--Hb_000173_410 Hb_000069_210 Hb_000069_210 Hb_007416_090--Hb_000069_210 Hb_001898_080 Hb_001898_080 Hb_007416_090--Hb_001898_080 Hb_000116_270 Hb_000116_270 Hb_007416_090--Hb_000116_270 Hb_001789_150 Hb_001789_150 Hb_007416_090--Hb_001789_150 Hb_149985_010 Hb_149985_010 Hb_007416_090--Hb_149985_010 Hb_000095_080 Hb_000095_080 Hb_007416_090--Hb_000095_080 Hb_000140_380--Hb_000252_100 Hb_004078_040 Hb_004078_040 Hb_000140_380--Hb_004078_040 Hb_000787_020 Hb_000787_020 Hb_000140_380--Hb_000787_020 Hb_000140_380--Hb_000173_410 Hb_000890_150 Hb_000890_150 Hb_000140_380--Hb_000890_150 Hb_000454_090 Hb_000454_090 Hb_000140_380--Hb_000454_090 Hb_000173_410--Hb_000454_090 Hb_000173_410--Hb_000252_100 Hb_000220_100 Hb_000220_100 Hb_000173_410--Hb_000220_100 Hb_000359_060 Hb_000359_060 Hb_000173_410--Hb_000359_060 Hb_005765_050 Hb_005765_050 Hb_000173_410--Hb_005765_050 Hb_000173_410--Hb_004078_040 Hb_000252_100--Hb_000454_090 Hb_000252_100--Hb_003305_040 Hb_000505_150 Hb_000505_150 Hb_000252_100--Hb_000505_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
112.101 87.7415 94.2188 352.827 77.982 139.772
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
154.536 199.442 264.316 190.703 129.093

CAGE analysis