Hb_000214_090

Information

Type -
Description -
Location Contig214: 286678-295087
Sequence    

Annotation

kegg
ID pper:PRUPE_ppb013312mg
description hypothetical protein
nr
ID XP_012481130.1
description PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
swissprot
ID -
description -
trembl
ID A0A067KEX3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13738 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000214_090 0.0 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
2 Hb_040779_010 0.2108136906 - - -
3 Hb_012107_070 0.2330533078 - - -
4 Hb_000988_060 0.2335737733 - - hypothetical protein JCGZ_21307 [Jatropha curcas]
5 Hb_005535_060 0.2364695832 - - -
6 Hb_004534_020 0.2403132621 - - PREDICTED: cysteine proteinase inhibitor B [Jatropha curcas]
7 Hb_036693_010 0.2556199658 - - -
8 Hb_002783_050 0.2562621017 - - zinc finger protein, putative [Ricinus communis]
9 Hb_000836_050 0.2699794412 - - -
10 Hb_007926_010 0.2702423967 - - PREDICTED: UPF0554 protein C2orf43 homolog isoform X4 [Citrus sinensis]
11 Hb_028848_030 0.2779932981 - - -
12 Hb_107847_010 0.2789847697 - - 3-isopropylmalate dehydratase, putative [Ricinus communis]
13 Hb_002609_100 0.2825934533 - - PREDICTED: uncharacterized protein LOC105133073 isoform X1 [Populus euphratica]
14 Hb_020549_010 0.2829753472 - - PREDICTED: uncharacterized protein LOC105638664 isoform X2 [Jatropha curcas]
15 Hb_000613_020 0.2837190174 - - PREDICTED: U-box domain-containing protein 15 [Jatropha curcas]
16 Hb_000608_040 0.2841291681 - - -
17 Hb_005517_010 0.2855506372 - - Chorismate mutase, chloroplast precursor, putative [Ricinus communis]
18 Hb_000258_320 0.2861251304 - - -
19 Hb_023647_040 0.2881608855 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
20 Hb_003772_080 0.288499908 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]

Gene co-expression network

sample Hb_000214_090 Hb_000214_090 Hb_040779_010 Hb_040779_010 Hb_000214_090--Hb_040779_010 Hb_012107_070 Hb_012107_070 Hb_000214_090--Hb_012107_070 Hb_000988_060 Hb_000988_060 Hb_000214_090--Hb_000988_060 Hb_005535_060 Hb_005535_060 Hb_000214_090--Hb_005535_060 Hb_004534_020 Hb_004534_020 Hb_000214_090--Hb_004534_020 Hb_036693_010 Hb_036693_010 Hb_000214_090--Hb_036693_010 Hb_184629_010 Hb_184629_010 Hb_040779_010--Hb_184629_010 Hb_000200_060 Hb_000200_060 Hb_040779_010--Hb_000200_060 Hb_028848_030 Hb_028848_030 Hb_040779_010--Hb_028848_030 Hb_000922_440 Hb_000922_440 Hb_040779_010--Hb_000922_440 Hb_040779_010--Hb_012107_070 Hb_005517_010 Hb_005517_010 Hb_012107_070--Hb_005517_010 Hb_012107_070--Hb_036693_010 Hb_012107_070--Hb_028848_030 Hb_005155_020 Hb_005155_020 Hb_012107_070--Hb_005155_020 Hb_061466_020 Hb_061466_020 Hb_012107_070--Hb_061466_020 Hb_012184_050 Hb_012184_050 Hb_000988_060--Hb_012184_050 Hb_121729_020 Hb_121729_020 Hb_000988_060--Hb_121729_020 Hb_000988_060--Hb_005535_060 Hb_000608_040 Hb_000608_040 Hb_000988_060--Hb_000608_040 Hb_005695_060 Hb_005695_060 Hb_000988_060--Hb_005695_060 Hb_063409_020 Hb_063409_020 Hb_000988_060--Hb_063409_020 Hb_005535_060--Hb_000608_040 Hb_001703_130 Hb_001703_130 Hb_005535_060--Hb_001703_130 Hb_002805_170 Hb_002805_170 Hb_005535_060--Hb_002805_170 Hb_005535_060--Hb_012184_050 Hb_001473_190 Hb_001473_190 Hb_005535_060--Hb_001473_190 Hb_005535_060--Hb_063409_020 Hb_003859_010 Hb_003859_010 Hb_004534_020--Hb_003859_010 Hb_137543_010 Hb_137543_010 Hb_004534_020--Hb_137543_010 Hb_007382_040 Hb_007382_040 Hb_004534_020--Hb_007382_040 Hb_001565_100 Hb_001565_100 Hb_004534_020--Hb_001565_100 Hb_002609_100 Hb_002609_100 Hb_004534_020--Hb_002609_100 Hb_166786_030 Hb_166786_030 Hb_004534_020--Hb_166786_030 Hb_036693_010--Hb_005155_020 Hb_036693_010--Hb_005517_010 Hb_000169_190 Hb_000169_190 Hb_036693_010--Hb_000169_190 Hb_000099_090 Hb_000099_090 Hb_036693_010--Hb_000099_090 Hb_036693_010--Hb_012184_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.296965 0.119 0.0914032 0 0.139097 0.164606
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0453146 0 0 0 0

CAGE analysis