Hb_000221_170

Information

Type -
Description -
Location Contig221: 217313-220734
Sequence    

Annotation

kegg
ID vvi:100245520
description alcohol dehydrogenase-like 1
nr
ID XP_012067911.1
description PREDICTED: alcohol dehydrogenase-like 2 [Jatropha curcas]
swissprot
ID Q9SK87
description Alcohol dehydrogenase-like 2 OS=Arabidopsis thaliana GN=At1g22440 PE=2 SV=1
trembl
ID A0A067LBC3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15821 PE=3 SV=1
Gene Ontology
ID GO:0008270
description alcohol dehydrogenase-like 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000221_170 0.0 - - PREDICTED: alcohol dehydrogenase-like 2 [Jatropha curcas]
2 Hb_000876_050 0.074860384 - - PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Jatropha curcas]
3 Hb_029508_030 0.0892324754 transcription factor TF Family: C2H2 hypothetical protein POPTR_0002s04880g [Populus trichocarpa]
4 Hb_001864_010 0.0961384172 - - conserved hypothetical protein [Ricinus communis]
5 Hb_005489_160 0.1043418615 - - PREDICTED: primary amine oxidase-like [Jatropha curcas]
6 Hb_001709_070 0.1060829774 - - carbohydrate binding protein, putative [Ricinus communis]
7 Hb_005333_100 0.1076684383 - - conserved hypothetical protein [Ricinus communis]
8 Hb_005797_030 0.107786612 - - PREDICTED: MATE efflux family protein LAL5-like [Jatropha curcas]
9 Hb_000920_360 0.1164756969 - - PREDICTED: (R,S)-reticuline 7-O-methyltransferase-like [Jatropha curcas]
10 Hb_001623_470 0.124976034 - - ammonium transporter, putative [Ricinus communis]
11 Hb_012395_070 0.1258186104 - - PREDICTED: probable metal-nicotianamine transporter YSL6 [Jatropha curcas]
12 Hb_000512_040 0.1280853341 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
13 Hb_000286_190 0.1282368621 - - PREDICTED: probable receptor-like protein kinase At1g11050 [Jatropha curcas]
14 Hb_003086_200 0.1286950064 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
15 Hb_000120_980 0.1289766677 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 5-like [Jatropha curcas]
16 Hb_000684_010 0.1320619332 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
17 Hb_008503_020 0.1342300898 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
18 Hb_000976_060 0.1343549978 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
19 Hb_004162_040 0.1348072877 - - PREDICTED: lysosomal Pro-X carboxypeptidase-like [Crassostrea gigas]
20 Hb_001454_160 0.1356015113 - - PREDICTED: translocase of chloroplast 159, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000221_170 Hb_000221_170 Hb_000876_050 Hb_000876_050 Hb_000221_170--Hb_000876_050 Hb_029508_030 Hb_029508_030 Hb_000221_170--Hb_029508_030 Hb_001864_010 Hb_001864_010 Hb_000221_170--Hb_001864_010 Hb_005489_160 Hb_005489_160 Hb_000221_170--Hb_005489_160 Hb_001709_070 Hb_001709_070 Hb_000221_170--Hb_001709_070 Hb_005333_100 Hb_005333_100 Hb_000221_170--Hb_005333_100 Hb_000684_010 Hb_000684_010 Hb_000876_050--Hb_000684_010 Hb_000876_050--Hb_005333_100 Hb_000120_980 Hb_000120_980 Hb_000876_050--Hb_000120_980 Hb_005542_110 Hb_005542_110 Hb_000876_050--Hb_005542_110 Hb_010813_030 Hb_010813_030 Hb_000876_050--Hb_010813_030 Hb_000286_190 Hb_000286_190 Hb_029508_030--Hb_000286_190 Hb_000920_360 Hb_000920_360 Hb_029508_030--Hb_000920_360 Hb_029508_030--Hb_001864_010 Hb_029508_030--Hb_001709_070 Hb_029508_030--Hb_000876_050 Hb_005797_030 Hb_005797_030 Hb_001864_010--Hb_005797_030 Hb_002007_230 Hb_002007_230 Hb_001864_010--Hb_002007_230 Hb_001864_010--Hb_000286_190 Hb_008503_020 Hb_008503_020 Hb_001864_010--Hb_008503_020 Hb_001104_280 Hb_001104_280 Hb_005489_160--Hb_001104_280 Hb_005489_160--Hb_005797_030 Hb_151364_010 Hb_151364_010 Hb_005489_160--Hb_151364_010 Hb_005489_160--Hb_001864_010 Hb_002475_100 Hb_002475_100 Hb_005489_160--Hb_002475_100 Hb_004162_040 Hb_004162_040 Hb_001709_070--Hb_004162_040 Hb_124385_010 Hb_124385_010 Hb_001709_070--Hb_124385_010 Hb_001709_070--Hb_008503_020 Hb_001623_470 Hb_001623_470 Hb_001709_070--Hb_001623_470 Hb_005333_100--Hb_000120_980 Hb_005333_100--Hb_000684_010 Hb_000976_060 Hb_000976_060 Hb_005333_100--Hb_000976_060 Hb_001838_010 Hb_001838_010 Hb_005333_100--Hb_001838_010 Hb_000255_020 Hb_000255_020 Hb_005333_100--Hb_000255_020 Hb_000489_020 Hb_000489_020 Hb_005333_100--Hb_000489_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.22722 0.150759 0.179612 0.0154234 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.60187 0.491055

CAGE analysis