Hb_000221_190

Information

Type -
Description -
Location Contig221: 232689-235005
Sequence    

Annotation

kegg
ID vvi:100257548
description 14-3-3 protein
nr
ID XP_012067905.1
description PREDICTED: 14-3-3-like protein [Jatropha curcas]
swissprot
ID P46266
description 14-3-3-like protein OS=Pisum sativum PE=2 SV=1
trembl
ID A0A067L2F2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15820 PE=3 SV=1
Gene Ontology
ID GO:0004519
description 14-3-3-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_22789: 232821-235072
cDNA
(Sanger)
(ID:Location)		 005_K11.ab1: 234392-235070

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000221_190 0.0 - - PREDICTED: 14-3-3-like protein [Jatropha curcas]
2 Hb_003582_060 0.055778422 transcription factor TF Family: BBR-BPC PREDICTED: protein BASIC PENTACYSTEINE2-like isoform X1 [Jatropha curcas]
3 Hb_012022_040 0.0598057513 - - Protein SIS1, putative [Ricinus communis]
4 Hb_000310_020 0.0603709571 - - hypothetical protein JCGZ_20797 [Jatropha curcas]
5 Hb_000505_130 0.0605136825 - - PREDICTED: uncharacterized protein LOC105641262 isoform X1 [Jatropha curcas]
6 Hb_006615_240 0.0628653382 - - PREDICTED: uncharacterized protein LOC105640673 [Jatropha curcas]
7 Hb_001278_100 0.0648932037 - - PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Jatropha curcas]
8 Hb_022250_060 0.0674459236 - - PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-1-like isoform X1 [Jatropha curcas]
9 Hb_000928_070 0.067584127 - - PREDICTED: maltose excess protein 1, chloroplastic-like [Jatropha curcas]
10 Hb_000856_010 0.0686759551 - - PREDICTED: uncharacterized protein LOC105640466 [Jatropha curcas]
11 Hb_017895_040 0.0712718377 - - hypothetical protein POPTR_0006s08120g [Populus trichocarpa]
12 Hb_164010_040 0.0720201473 - - serine/threonine protein kinase, putative [Ricinus communis]
13 Hb_000869_080 0.0749163942 - - PREDICTED: uncharacterized protein LOC105641084 isoform X2 [Jatropha curcas]
14 Hb_004324_090 0.0752373824 - - PREDICTED: uncharacterized protein LOC105648352 isoform X1 [Jatropha curcas]
15 Hb_000729_030 0.0762546646 - - PREDICTED: dentin sialophosphoprotein [Jatropha curcas]
16 Hb_005162_090 0.0763965947 - - PREDICTED: uncharacterized protein LOC105648425 [Jatropha curcas]
17 Hb_001766_060 0.0764564401 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000161_130 0.0781162071 - - PREDICTED: nifU-like protein 2, chloroplastic [Jatropha curcas]
19 Hb_062226_130 0.0794974004 - - PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4 [Jatropha curcas]
20 Hb_000336_150 0.0798014672 - - ribulose-5-phosphate-3-epimerase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000221_190 Hb_000221_190 Hb_003582_060 Hb_003582_060 Hb_000221_190--Hb_003582_060 Hb_012022_040 Hb_012022_040 Hb_000221_190--Hb_012022_040 Hb_000310_020 Hb_000310_020 Hb_000221_190--Hb_000310_020 Hb_000505_130 Hb_000505_130 Hb_000221_190--Hb_000505_130 Hb_006615_240 Hb_006615_240 Hb_000221_190--Hb_006615_240 Hb_001278_100 Hb_001278_100 Hb_000221_190--Hb_001278_100 Hb_003582_060--Hb_006615_240 Hb_000003_230 Hb_000003_230 Hb_003582_060--Hb_000003_230 Hb_003304_020 Hb_003304_020 Hb_003582_060--Hb_003304_020 Hb_017895_040 Hb_017895_040 Hb_003582_060--Hb_017895_040 Hb_001300_150 Hb_001300_150 Hb_003582_060--Hb_001300_150 Hb_000856_010 Hb_000856_010 Hb_012022_040--Hb_000856_010 Hb_012022_040--Hb_001278_100 Hb_004109_220 Hb_004109_220 Hb_012022_040--Hb_004109_220 Hb_149985_010 Hb_149985_010 Hb_012022_040--Hb_149985_010 Hb_000928_070 Hb_000928_070 Hb_012022_040--Hb_000928_070 Hb_000310_020--Hb_000505_130 Hb_000161_130 Hb_000161_130 Hb_000310_020--Hb_000161_130 Hb_000310_020--Hb_006615_240 Hb_004324_090 Hb_004324_090 Hb_000310_020--Hb_004324_090 Hb_003124_150 Hb_003124_150 Hb_000310_020--Hb_003124_150 Hb_001931_010 Hb_001931_010 Hb_000505_130--Hb_001931_010 Hb_044653_040 Hb_044653_040 Hb_000505_130--Hb_044653_040 Hb_000505_130--Hb_003124_150 Hb_006326_040 Hb_006326_040 Hb_000505_130--Hb_006326_040 Hb_010098_050 Hb_010098_050 Hb_006615_240--Hb_010098_050 Hb_000390_300 Hb_000390_300 Hb_006615_240--Hb_000390_300 Hb_004109_170 Hb_004109_170 Hb_006615_240--Hb_004109_170 Hb_006615_240--Hb_000003_230 Hb_001341_150 Hb_001341_150 Hb_006615_240--Hb_001341_150 Hb_000032_380 Hb_000032_380 Hb_001278_100--Hb_000032_380 Hb_000270_310 Hb_000270_310 Hb_001278_100--Hb_000270_310 Hb_001278_100--Hb_003582_060 Hb_001278_100--Hb_000390_300 Hb_164010_040 Hb_164010_040 Hb_001278_100--Hb_164010_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
26.1267 33.5093 36.5697 41.221 18.2882 24.0798
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
35.4149 62.2933 42.772 25.0386 29.3178

CAGE analysis