Hb_000225_060

Information

Type -
Description -
Location Contig225: 167719-171994
Sequence    

Annotation

kegg
ID rcu:RCOM_0855090
description Protein C10orf22, putative
nr
ID XP_012083031.1
description PREDICTED: 2-aminoethanethiol dioxygenase-like [Jatropha curcas]
swissprot
ID Q8LGJ5
description Plant cysteine oxidase 2 OS=Arabidopsis thaliana GN=PCO2 PE=1 SV=1
trembl
ID A0A067LE05
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09732 PE=4 SV=1
Gene Ontology
ID GO:0016702
description 2-aminoethanethiol dioxygenase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_23422: 167707-171856
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000225_060 0.0 - - PREDICTED: 2-aminoethanethiol dioxygenase-like [Jatropha curcas]
2 Hb_110560_010 0.1025348286 - - ATP binding protein, putative [Ricinus communis]
3 Hb_000099_150 0.1036286373 - - PREDICTED: calcium-dependent protein kinase 3 [Jatropha curcas]
4 Hb_006538_080 0.1084109463 - - PREDICTED: caffeoylshikimate esterase [Jatropha curcas]
5 Hb_009620_020 0.1146330447 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001102_240 0.1182189169 - - PREDICTED: NADH kinase isoform X1 [Jatropha curcas]
7 Hb_002701_010 0.1209773472 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
8 Hb_000071_070 0.1210525101 - - PREDICTED: U-box domain-containing protein 33-like [Jatropha curcas]
9 Hb_005365_030 0.1222154355 - - hypothetical protein POPTR_0002s24010g [Populus trichocarpa]
10 Hb_000484_130 0.1226281482 - - splicing factor, putative [Ricinus communis]
11 Hb_000684_380 0.1260083444 - - PREDICTED: 60S ribosomal protein L4 [Vitis vinifera]
12 Hb_022250_060 0.1262832995 - - PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-1-like isoform X1 [Jatropha curcas]
13 Hb_002027_350 0.1266712901 - - PREDICTED: U1 small nuclear ribonucleoprotein C-like [Jatropha curcas]
14 Hb_050847_050 0.1274150895 - - PREDICTED: uncharacterized protein LOC105649140 isoform X1 [Jatropha curcas]
15 Hb_000465_300 0.1291797846 - - PREDICTED: putative dual specificity protein phosphatase DSP8 [Jatropha curcas]
16 Hb_000723_230 0.129215198 - - hypothetical protein CISIN_1g017413mg [Citrus sinensis]
17 Hb_004705_080 0.1314290094 transcription factor TF Family: ARF transcription factor, putative [Ricinus communis]
18 Hb_001691_140 0.1319892762 - - mitochondrial 50S ribosomal protein L21 [Hevea brasiliensis]
19 Hb_003994_260 0.1331625325 - - PREDICTED: uncharacterized protein LOC105646151 [Jatropha curcas]
20 Hb_005207_050 0.1335403504 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 39 [Jatropha curcas]

Gene co-expression network

sample Hb_000225_060 Hb_000225_060 Hb_110560_010 Hb_110560_010 Hb_000225_060--Hb_110560_010 Hb_000099_150 Hb_000099_150 Hb_000225_060--Hb_000099_150 Hb_006538_080 Hb_006538_080 Hb_000225_060--Hb_006538_080 Hb_009620_020 Hb_009620_020 Hb_000225_060--Hb_009620_020 Hb_001102_240 Hb_001102_240 Hb_000225_060--Hb_001102_240 Hb_002701_010 Hb_002701_010 Hb_000225_060--Hb_002701_010 Hb_008566_050 Hb_008566_050 Hb_110560_010--Hb_008566_050 Hb_004705_080 Hb_004705_080 Hb_110560_010--Hb_004705_080 Hb_110560_010--Hb_000099_150 Hb_000045_300 Hb_000045_300 Hb_110560_010--Hb_000045_300 Hb_091433_020 Hb_091433_020 Hb_110560_010--Hb_091433_020 Hb_001691_140 Hb_001691_140 Hb_000099_150--Hb_001691_140 Hb_000136_260 Hb_000136_260 Hb_000099_150--Hb_000136_260 Hb_002027_350 Hb_002027_350 Hb_000099_150--Hb_002027_350 Hb_000327_230 Hb_000327_230 Hb_000099_150--Hb_000327_230 Hb_017987_050 Hb_017987_050 Hb_000099_150--Hb_017987_050 Hb_002078_140 Hb_002078_140 Hb_000099_150--Hb_002078_140 Hb_014068_050 Hb_014068_050 Hb_006538_080--Hb_014068_050 Hb_002301_170 Hb_002301_170 Hb_006538_080--Hb_002301_170 Hb_004631_210 Hb_004631_210 Hb_006538_080--Hb_004631_210 Hb_050847_050 Hb_050847_050 Hb_006538_080--Hb_050847_050 Hb_000111_180 Hb_000111_180 Hb_006538_080--Hb_000111_180 Hb_000071_070 Hb_000071_070 Hb_009620_020--Hb_000071_070 Hb_000011_400 Hb_000011_400 Hb_009620_020--Hb_000011_400 Hb_001123_320 Hb_001123_320 Hb_009620_020--Hb_001123_320 Hb_020025_040 Hb_020025_040 Hb_009620_020--Hb_020025_040 Hb_000483_260 Hb_000483_260 Hb_009620_020--Hb_000483_260 Hb_005054_350 Hb_005054_350 Hb_001102_240--Hb_005054_350 Hb_005725_270 Hb_005725_270 Hb_001102_240--Hb_005725_270 Hb_004837_240 Hb_004837_240 Hb_001102_240--Hb_004837_240 Hb_001102_240--Hb_002078_140 Hb_001102_240--Hb_000136_260 Hb_005365_030 Hb_005365_030 Hb_001102_240--Hb_005365_030 Hb_022318_020 Hb_022318_020 Hb_002701_010--Hb_022318_020 Hb_163256_020 Hb_163256_020 Hb_002701_010--Hb_163256_020 Hb_006355_040 Hb_006355_040 Hb_002701_010--Hb_006355_040 Hb_000424_200 Hb_000424_200 Hb_002701_010--Hb_000424_200 Hb_002701_010--Hb_000099_150 Hb_002307_310 Hb_002307_310 Hb_002701_010--Hb_002307_310
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.852 20.544 21.7352 13.726 8.52098 8.96256
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.1013 29.998 19.1549 23.0816 5.31196

CAGE analysis