Hb_000226_070

Information

Type -
Description -
Location Contig226: 83878-89295
Sequence    

Annotation

kegg
ID rcu:RCOM_0003350
description Pyrophosphate-energized vacuolar membrane proton pump, putative (EC:1.3.1.74)
nr
ID XP_012081156.1
description PREDICTED: pyrophosphate-energized vacuolar membrane proton pump [Jatropha curcas]
swissprot
ID P21616
description Pyrophosphate-energized vacuolar membrane proton pump OS=Vigna radiata var. radiata PE=1 SV=4
trembl
ID A0A067K5F3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17005 PE=3 SV=1
Gene Ontology
ID GO:0016020
description pyrophosphate-energized vacuolar membrane proton pump

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000226_070 0.0 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump [Jatropha curcas]
2 Hb_010812_110 0.1473595824 - - putative plant disease resistance family protein [Populus trichocarpa]
3 Hb_001474_040 0.1684895884 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 [Jatropha curcas]
4 Hb_000300_230 0.1710299894 - - PREDICTED: cation/calcium exchanger 2 [Jatropha curcas]
5 Hb_002129_020 0.1739984261 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX14 [Jatropha curcas]
6 Hb_000300_520 0.1756975295 - - hypothetical protein JCGZ_02702 [Jatropha curcas]
7 Hb_002046_150 0.1763144581 - - PREDICTED: probable receptor-like protein kinase At5g15080 [Jatropha curcas]
8 Hb_026740_020 0.1794404372 desease resistance Gene Name: NB-ARC NBS-LRR resistance protein RGH1 [Manihot esculenta]
9 Hb_000805_140 0.1797604195 transcription factor TF Family: GRAS Chitin-inducible gibberellin-responsive protein, putative [Ricinus communis]
10 Hb_024074_020 0.1837527206 - - PREDICTED: probable serine/threonine-protein kinase At1g09600 [Jatropha curcas]
11 Hb_000236_160 0.1850977203 - - PREDICTED: UDP-glucuronate 4-epimerase 6 [Jatropha curcas]
12 Hb_001216_110 0.1882888766 - - PREDICTED: protein GPR107-like [Jatropha curcas]
13 Hb_002660_110 0.1901274135 - - PREDICTED: serine/threonine-protein kinase-like protein CCR1 isoform X1 [Jatropha curcas]
14 Hb_002289_150 0.1905348043 - - PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Jatropha curcas]
15 Hb_000193_300 0.1918747515 - - PREDICTED: putative glycosyltransferase 5 [Jatropha curcas]
16 Hb_017014_010 0.1976984881 - - PREDICTED: syntaxin-132-like isoform X1 [Jatropha curcas]
17 Hb_007483_060 0.1978049312 desease resistance Gene Name: ABC_membrane multidrug resistance protein 1, 2, putative [Ricinus communis]
18 Hb_000098_170 0.1980733556 - - hypothetical protein JCGZ_06491 [Jatropha curcas]
19 Hb_012762_060 0.1994820334 - - Vitellogenic carboxypeptidase, putative [Ricinus communis]
20 Hb_066514_010 0.1999865792 - - hypothetical protein RCOM_0204720 [Ricinus communis]

Gene co-expression network

sample Hb_000226_070 Hb_000226_070 Hb_010812_110 Hb_010812_110 Hb_000226_070--Hb_010812_110 Hb_001474_040 Hb_001474_040 Hb_000226_070--Hb_001474_040 Hb_000300_230 Hb_000300_230 Hb_000226_070--Hb_000300_230 Hb_002129_020 Hb_002129_020 Hb_000226_070--Hb_002129_020 Hb_000300_520 Hb_000300_520 Hb_000226_070--Hb_000300_520 Hb_002046_150 Hb_002046_150 Hb_000226_070--Hb_002046_150 Hb_010812_110--Hb_001474_040 Hb_000844_030 Hb_000844_030 Hb_010812_110--Hb_000844_030 Hb_026740_020 Hb_026740_020 Hb_010812_110--Hb_026740_020 Hb_014497_040 Hb_014497_040 Hb_010812_110--Hb_014497_040 Hb_005941_030 Hb_005941_030 Hb_010812_110--Hb_005941_030 Hb_000281_060 Hb_000281_060 Hb_001474_040--Hb_000281_060 Hb_002498_050 Hb_002498_050 Hb_001474_040--Hb_002498_050 Hb_000818_100 Hb_000818_100 Hb_001474_040--Hb_000818_100 Hb_001474_040--Hb_000844_030 Hb_000797_060 Hb_000797_060 Hb_000300_230--Hb_000797_060 Hb_002289_150 Hb_002289_150 Hb_000300_230--Hb_002289_150 Hb_001754_060 Hb_001754_060 Hb_000300_230--Hb_001754_060 Hb_004449_090 Hb_004449_090 Hb_000300_230--Hb_004449_090 Hb_000138_060 Hb_000138_060 Hb_000300_230--Hb_000138_060 Hb_005489_150 Hb_005489_150 Hb_000300_230--Hb_005489_150 Hb_001195_090 Hb_001195_090 Hb_002129_020--Hb_001195_090 Hb_001216_110 Hb_001216_110 Hb_002129_020--Hb_001216_110 Hb_020586_010 Hb_020586_010 Hb_002129_020--Hb_020586_010 Hb_009674_010 Hb_009674_010 Hb_002129_020--Hb_009674_010 Hb_028639_030 Hb_028639_030 Hb_002129_020--Hb_028639_030 Hb_002157_270 Hb_002157_270 Hb_002129_020--Hb_002157_270 Hb_069355_010 Hb_069355_010 Hb_000300_520--Hb_069355_010 Hb_000300_520--Hb_002129_020 Hb_000300_520--Hb_001195_090 Hb_001999_100 Hb_001999_100 Hb_000300_520--Hb_001999_100 Hb_000300_520--Hb_001216_110 Hb_032143_020 Hb_032143_020 Hb_000300_520--Hb_032143_020 Hb_024074_020 Hb_024074_020 Hb_002046_150--Hb_024074_020 Hb_012651_010 Hb_012651_010 Hb_002046_150--Hb_012651_010 Hb_000665_190 Hb_000665_190 Hb_002046_150--Hb_000665_190 Hb_000359_310 Hb_000359_310 Hb_002046_150--Hb_000359_310 Hb_000002_480 Hb_000002_480 Hb_002046_150--Hb_000002_480 Hb_000193_300 Hb_000193_300 Hb_002046_150--Hb_000193_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.67142 1.47874 1.57666 10.1487 1.39685 1.08227
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.102797 0.377486 1.41438 1.0598 2.1793

CAGE analysis