Hb_000226_110

Information

Type -
Description -
Location Contig226: 141457-142979
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000226_110 0.0 - - -
2 Hb_006499_020 0.0932246429 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
3 Hb_026419_010 0.0976981298 - - PREDICTED: cyclin-D3-1-like [Jatropha curcas]
4 Hb_116190_010 0.0993442294 - - PREDICTED: uncharacterized protein LOC105118535 [Populus euphratica]
5 Hb_001369_270 0.1080839818 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
6 Hb_003861_090 0.1127773482 - - adenylsulfate kinase, putative [Ricinus communis]
7 Hb_000373_060 0.1137160235 - - PREDICTED: extensin-3 [Camelina sativa]
8 Hb_060152_010 0.1138457843 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
9 Hb_168561_010 0.1380477712 - - PREDICTED: notchless protein homolog [Jatropha curcas]
10 Hb_019278_010 0.1405055338 - - PREDICTED: uncharacterized protein LOC105638282 [Jatropha curcas]
11 Hb_000645_250 0.1495912906 - - PREDICTED: putative beta-D-xylosidase [Jatropha curcas]
12 Hb_010334_050 0.1498460389 - - conserved hypothetical protein [Ricinus communis]
13 Hb_110737_010 0.1535140552 - - PREDICTED: aldose 1-epimerase-like [Jatropha curcas]
14 Hb_000337_030 0.1578697115 - - amino acid transporter, putative [Ricinus communis]
15 Hb_003858_080 0.1625004189 - - Germin-like protein 2 [Theobroma cacao]
16 Hb_000087_120 0.16711278 - - AMP dependent CoA ligase, putative [Ricinus communis]
17 Hb_000751_060 0.1683411049 - - PREDICTED: extensin-2-like, partial [Sesamum indicum]
18 Hb_000237_120 0.168451157 - - PREDICTED: beta-galactosidase 3-like [Jatropha curcas]
19 Hb_000847_120 0.1693521854 - - hypothetical protein JCGZ_15115 [Jatropha curcas]
20 Hb_000751_070 0.1716824045 - - -

Gene co-expression network

sample Hb_000226_110 Hb_000226_110 Hb_006499_020 Hb_006499_020 Hb_000226_110--Hb_006499_020 Hb_026419_010 Hb_026419_010 Hb_000226_110--Hb_026419_010 Hb_116190_010 Hb_116190_010 Hb_000226_110--Hb_116190_010 Hb_001369_270 Hb_001369_270 Hb_000226_110--Hb_001369_270 Hb_003861_090 Hb_003861_090 Hb_000226_110--Hb_003861_090 Hb_000373_060 Hb_000373_060 Hb_000226_110--Hb_000373_060 Hb_168561_010 Hb_168561_010 Hb_006499_020--Hb_168561_010 Hb_006499_020--Hb_116190_010 Hb_006499_020--Hb_003861_090 Hb_006499_020--Hb_000373_060 Hb_000639_010 Hb_000639_010 Hb_006499_020--Hb_000639_010 Hb_004709_030 Hb_004709_030 Hb_026419_010--Hb_004709_030 Hb_019278_010 Hb_019278_010 Hb_026419_010--Hb_019278_010 Hb_000087_120 Hb_000087_120 Hb_026419_010--Hb_000087_120 Hb_000365_440 Hb_000365_440 Hb_026419_010--Hb_000365_440 Hb_000230_020 Hb_000230_020 Hb_026419_010--Hb_000230_020 Hb_116190_010--Hb_000373_060 Hb_116190_010--Hb_003861_090 Hb_010334_050 Hb_010334_050 Hb_116190_010--Hb_010334_050 Hb_116190_010--Hb_168561_010 Hb_110737_010 Hb_110737_010 Hb_001369_270--Hb_110737_010 Hb_016835_020 Hb_016835_020 Hb_001369_270--Hb_016835_020 Hb_060152_010 Hb_060152_010 Hb_001369_270--Hb_060152_010 Hb_003858_080 Hb_003858_080 Hb_001369_270--Hb_003858_080 Hb_003030_050 Hb_003030_050 Hb_001369_270--Hb_003030_050 Hb_003861_090--Hb_000373_060 Hb_003861_090--Hb_003858_080 Hb_003861_090--Hb_010334_050 Hb_000373_060--Hb_010334_050 Hb_000645_250 Hb_000645_250 Hb_000373_060--Hb_000645_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.165978 0.208748 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.31486 0.309385

CAGE analysis