Hb_000227_360

Information

Type -
Description -
Location Contig227: 308945-312881
Sequence    

Annotation

kegg
ID rcu:RCOM_0914030
description Mavicyanin, putative
nr
ID XP_012069595.1
description PREDICTED: mavicyanin [Jatropha curcas]
swissprot
ID P80728
description Mavicyanin OS=Cucurbita pepo PE=1 SV=1
trembl
ID A0A067L7U8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02152 PE=4 SV=1
Gene Ontology
ID GO:0009055
description cupredoxin superfamily

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_23648: 308995-312813
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000227_360 0.0 - - PREDICTED: mavicyanin [Jatropha curcas]
2 Hb_108090_010 0.0612165306 - - conserved hypothetical protein [Ricinus communis]
3 Hb_005440_040 0.0617890513 - - PREDICTED: microtubule-associated protein 70-5 [Jatropha curcas]
4 Hb_003858_010 0.0673462291 - - xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum]
5 Hb_001456_030 0.0693203992 - - PREDICTED: bifunctional pinoresinol-lariciresinol reductase 2 [Vitis vinifera]
6 Hb_011344_040 0.0693257922 - - PREDICTED: 21 kDa protein [Jatropha curcas]
7 Hb_001357_290 0.0715262972 - - PREDICTED: uncharacterized protein LOC105632986 [Jatropha curcas]
8 Hb_001104_060 0.0742542642 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Jatropha curcas]
9 Hb_000531_030 0.0745997291 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000130_250 0.0746838738 - - PREDICTED: protein trichome birefringence-like 31 [Jatropha curcas]
11 Hb_003376_060 0.0752528621 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX9 isoform X1 [Jatropha curcas]
12 Hb_061700_010 0.0793050788 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Prunus mume]
13 Hb_000347_060 0.0906287951 - - PREDICTED: uncharacterized protein LOC105631356 [Jatropha curcas]
14 Hb_142204_010 0.0944372977 - - pyruvate decarboxylase [Saccharum officinarum]
15 Hb_185608_010 0.0972895038 - - hypothetical protein POPTR_0004s22210g [Populus trichocarpa]
16 Hb_011224_070 0.097688025 - - PREDICTED: solute carrier family 35 member E3 [Jatropha curcas]
17 Hb_012114_090 0.0980015507 - - tubulin beta chain, putative [Ricinus communis]
18 Hb_008008_040 0.098591987 - - PREDICTED: auxin-induced protein 15A-like [Jatropha curcas]
19 Hb_000964_080 0.0993703929 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Jatropha curcas]
20 Hb_050160_010 0.0996455628 - - hypothetical protein JCGZ_24934 [Jatropha curcas]

Gene co-expression network

sample Hb_000227_360 Hb_000227_360 Hb_108090_010 Hb_108090_010 Hb_000227_360--Hb_108090_010 Hb_005440_040 Hb_005440_040 Hb_000227_360--Hb_005440_040 Hb_003858_010 Hb_003858_010 Hb_000227_360--Hb_003858_010 Hb_001456_030 Hb_001456_030 Hb_000227_360--Hb_001456_030 Hb_011344_040 Hb_011344_040 Hb_000227_360--Hb_011344_040 Hb_001357_290 Hb_001357_290 Hb_000227_360--Hb_001357_290 Hb_061700_010 Hb_061700_010 Hb_108090_010--Hb_061700_010 Hb_108090_010--Hb_003858_010 Hb_108090_010--Hb_005440_040 Hb_000130_250 Hb_000130_250 Hb_108090_010--Hb_000130_250 Hb_000531_030 Hb_000531_030 Hb_108090_010--Hb_000531_030 Hb_007113_060 Hb_007113_060 Hb_005440_040--Hb_007113_060 Hb_006922_120 Hb_006922_120 Hb_005440_040--Hb_006922_120 Hb_005440_040--Hb_003858_010 Hb_005440_040--Hb_000531_030 Hb_181908_010 Hb_181908_010 Hb_003858_010--Hb_181908_010 Hb_008008_040 Hb_008008_040 Hb_003858_010--Hb_008008_040 Hb_001454_420 Hb_001454_420 Hb_003858_010--Hb_001454_420 Hb_142204_010 Hb_142204_010 Hb_003858_010--Hb_142204_010 Hb_003858_010--Hb_011344_040 Hb_005616_020 Hb_005616_020 Hb_001456_030--Hb_005616_020 Hb_003376_060 Hb_003376_060 Hb_001456_030--Hb_003376_060 Hb_000462_120 Hb_000462_120 Hb_001456_030--Hb_000462_120 Hb_001104_060 Hb_001104_060 Hb_001456_030--Hb_001104_060 Hb_000964_080 Hb_000964_080 Hb_001456_030--Hb_000964_080 Hb_185608_010 Hb_185608_010 Hb_011344_040--Hb_185608_010 Hb_010193_020 Hb_010193_020 Hb_011344_040--Hb_010193_020 Hb_011344_040--Hb_001357_290 Hb_057862_010 Hb_057862_010 Hb_011344_040--Hb_057862_010 Hb_001357_290--Hb_000130_250 Hb_000347_060 Hb_000347_060 Hb_001357_290--Hb_000347_060 Hb_001357_290--Hb_061700_010 Hb_000392_350 Hb_000392_350 Hb_001357_290--Hb_000392_350
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.24254 11.5813 71.0435 0.281913 0.0502926
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0654246 0 0 0.228869 33.8468

CAGE analysis