Hb_000236_480

Information

Type -
Description -
Location Contig236: 399486-402943
Sequence    

Annotation

kegg
ID rcu:RCOM_1172950
description cytochrome P450, putative (EC:1.3.3.9)
nr
ID XP_012088221.1
description PREDICTED: cytochrome P450 CYP72A219-like [Jatropha curcas]
swissprot
ID Q9LUC5
description Cytochrome P450 72A15 OS=Arabidopsis thaliana GN=CYP72A15 PE=2 SV=1
trembl
ID A0A067JJD9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25743 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 cyp72a219-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24737: 400966-402433
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000236_480 0.0 - - PREDICTED: cytochrome P450 CYP72A219-like [Jatropha curcas]
2 Hb_006289_020 0.155345421 - - PREDICTED: shugoshin-1 isoform X1 [Jatropha curcas]
3 Hb_004452_090 0.1598120065 - - hypothetical protein JCGZ_12231 [Jatropha curcas]
4 Hb_000031_300 0.1724895883 - - PREDICTED: histidine kinase 5 [Jatropha curcas]
5 Hb_001541_190 0.1758985327 - - PREDICTED: uncharacterized protein LOC105644700 [Jatropha curcas]
6 Hb_006060_010 0.1791066618 - - PREDICTED: cyclin-A2-2-like [Jatropha curcas]
7 Hb_000020_080 0.1805921294 transcription factor TF Family: MYB hypothetical protein JCGZ_09080 [Jatropha curcas]
8 Hb_002463_050 0.1867158355 - - conserved hypothetical protein [Ricinus communis]
9 Hb_004046_060 0.1868400494 - - PREDICTED: protein CDI [Jatropha curcas]
10 Hb_000890_020 0.1897364789 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
11 Hb_001040_060 0.1903919277 - - PREDICTED: CBS domain-containing protein CBSX5-like [Jatropha curcas]
12 Hb_000260_610 0.1908755664 - - PREDICTED: cell division cycle 20.1, cofactor of APC complex-like [Jatropha curcas]
13 Hb_002965_160 0.192366221 - - PREDICTED: uncharacterized protein LOC105643503 [Jatropha curcas]
14 Hb_000914_140 0.1929374531 transcription factor TF Family: Trihelix transcription factor, putative [Ricinus communis]
15 Hb_006153_010 0.1930391376 - - PREDICTED: monocopper oxidase-like protein SKU5 [Populus euphratica]
16 Hb_000316_060 0.1935038885 - - hypothetical protein CISIN_1g017081mg [Citrus sinensis]
17 Hb_004970_070 0.194024074 - - hypothetical protein POPTR_0002s12620g [Populus trichocarpa]
18 Hb_003878_060 0.1948776638 - - hypothetical protein B456_007G326900, partial [Gossypium raimondii]
19 Hb_001307_020 0.1963959502 - - electron carrier, putative [Ricinus communis]
20 Hb_000996_040 0.2004953007 - - hypothetical protein POPTR_0003s12500g [Populus trichocarpa]

Gene co-expression network

sample Hb_000236_480 Hb_000236_480 Hb_006289_020 Hb_006289_020 Hb_000236_480--Hb_006289_020 Hb_004452_090 Hb_004452_090 Hb_000236_480--Hb_004452_090 Hb_000031_300 Hb_000031_300 Hb_000236_480--Hb_000031_300 Hb_001541_190 Hb_001541_190 Hb_000236_480--Hb_001541_190 Hb_006060_010 Hb_006060_010 Hb_000236_480--Hb_006060_010 Hb_000020_080 Hb_000020_080 Hb_000236_480--Hb_000020_080 Hb_002965_160 Hb_002965_160 Hb_006289_020--Hb_002965_160 Hb_003878_060 Hb_003878_060 Hb_006289_020--Hb_003878_060 Hb_008725_070 Hb_008725_070 Hb_006289_020--Hb_008725_070 Hb_000960_090 Hb_000960_090 Hb_006289_020--Hb_000960_090 Hb_000288_090 Hb_000288_090 Hb_006289_020--Hb_000288_090 Hb_008173_060 Hb_008173_060 Hb_004452_090--Hb_008173_060 Hb_005701_110 Hb_005701_110 Hb_004452_090--Hb_005701_110 Hb_001155_050 Hb_001155_050 Hb_004452_090--Hb_001155_050 Hb_002217_190 Hb_002217_190 Hb_004452_090--Hb_002217_190 Hb_001040_060 Hb_001040_060 Hb_004452_090--Hb_001040_060 Hb_001828_110 Hb_001828_110 Hb_000031_300--Hb_001828_110 Hb_001953_140 Hb_001953_140 Hb_000031_300--Hb_001953_140 Hb_002965_060 Hb_002965_060 Hb_000031_300--Hb_002965_060 Hb_000152_170 Hb_000152_170 Hb_000031_300--Hb_000152_170 Hb_000465_350 Hb_000465_350 Hb_000031_300--Hb_000465_350 Hb_000069_300 Hb_000069_300 Hb_001541_190--Hb_000069_300 Hb_001307_020 Hb_001307_020 Hb_001541_190--Hb_001307_020 Hb_003667_020 Hb_003667_020 Hb_001541_190--Hb_003667_020 Hb_000175_300 Hb_000175_300 Hb_001541_190--Hb_000175_300 Hb_001638_120 Hb_001638_120 Hb_001541_190--Hb_001638_120 Hb_004970_070 Hb_004970_070 Hb_001541_190--Hb_004970_070 Hb_012753_150 Hb_012753_150 Hb_006060_010--Hb_012753_150 Hb_000260_610 Hb_000260_610 Hb_006060_010--Hb_000260_610 Hb_006060_010--Hb_003878_060 Hb_000960_120 Hb_000960_120 Hb_006060_010--Hb_000960_120 Hb_003119_040 Hb_003119_040 Hb_006060_010--Hb_003119_040 Hb_013344_010 Hb_013344_010 Hb_006060_010--Hb_013344_010 Hb_000020_080--Hb_012753_150 Hb_107078_010 Hb_107078_010 Hb_000020_080--Hb_107078_010 Hb_000388_040 Hb_000388_040 Hb_000020_080--Hb_000388_040 Hb_000020_080--Hb_006060_010 Hb_004218_050 Hb_004218_050 Hb_000020_080--Hb_004218_050 Hb_007545_110 Hb_007545_110 Hb_000020_080--Hb_007545_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0110511 0.118772 0.401085 0.223407 0 0.0215134
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0197749 0.0373962 0.0787502 0.0416659

CAGE analysis