Hb_000237_150

Information

Type -
Description -
Location Contig237: 168007-170329
Sequence    

Annotation

kegg
ID vvi:100259848
description bifunctional epoxide hydrolase 2
nr
ID XP_010107837.1
description Epoxide hydrolase 2 [Morus notabilis]
swissprot
ID P34914
description Bifunctional epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2
trembl
ID W9RXW6
description Epoxide hydrolase 2 OS=Morus notabilis GN=L484_027421 PE=4 SV=1
Gene Ontology
ID GO:0003824
description bifunctional epoxide hydrolase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24788: 168064-170307
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000237_150 0.0 - - Epoxide hydrolase 2 [Morus notabilis]
2 Hb_000238_060 0.0712736972 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
3 Hb_000852_050 0.0772975738 - - hypothetical protein POPTR_0018s02450g [Populus trichocarpa]
4 Hb_001405_100 0.0782445258 - - PREDICTED: lysM domain receptor-like kinase 4 [Jatropha curcas]
5 Hb_000616_050 0.0797104646 - - PREDICTED: uncharacterized protein LOC105639906 [Jatropha curcas]
6 Hb_000649_030 0.0834122183 - - scab resistance family protein [Populus trichocarpa]
7 Hb_002671_110 0.0874348535 - - PREDICTED: remorin-like [Jatropha curcas]
8 Hb_002150_010 0.09139611 - - hypothetical protein POPTR_0001s10240g [Populus trichocarpa]
9 Hb_001838_050 0.0920553314 - - hypothetical protein B456_007G218500 [Gossypium raimondii]
10 Hb_019229_020 0.0952346477 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
11 Hb_003031_030 0.1098807899 - - hypothetical protein JCGZ_21288 [Jatropha curcas]
12 Hb_002110_270 0.111771035 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH96 [Jatropha curcas]
13 Hb_000758_030 0.1118321603 transcription factor TF Family: ERF Ethylene-responsive transcription factor, putative [Ricinus communis]
14 Hb_001638_110 0.11237037 - - conserved hypothetical protein [Ricinus communis]
15 Hb_005228_170 0.1146886269 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
16 Hb_006006_070 0.1181381037 - - UDP-glucosyltransferase, putative [Ricinus communis]
17 Hb_000984_080 0.1228278881 - - PREDICTED: receptor-like protein kinase HAIKU2 [Jatropha curcas]
18 Hb_002391_350 0.1228922298 - - PREDICTED: uncharacterized protein LOC105647080 [Jatropha curcas]
19 Hb_002553_120 0.1232973483 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 1B [Jatropha curcas]
20 Hb_000081_020 0.1234053694 - - PREDICTED: protein NRT1/ PTR FAMILY 1.1-like [Camelina sativa]

Gene co-expression network

sample Hb_000237_150 Hb_000237_150 Hb_000238_060 Hb_000238_060 Hb_000237_150--Hb_000238_060 Hb_000852_050 Hb_000852_050 Hb_000237_150--Hb_000852_050 Hb_001405_100 Hb_001405_100 Hb_000237_150--Hb_001405_100 Hb_000616_050 Hb_000616_050 Hb_000237_150--Hb_000616_050 Hb_000649_030 Hb_000649_030 Hb_000237_150--Hb_000649_030 Hb_002671_110 Hb_002671_110 Hb_000237_150--Hb_002671_110 Hb_000238_060--Hb_001405_100 Hb_000238_060--Hb_000852_050 Hb_000238_060--Hb_002671_110 Hb_000081_020 Hb_000081_020 Hb_000238_060--Hb_000081_020 Hb_005228_170 Hb_005228_170 Hb_000238_060--Hb_005228_170 Hb_002150_010 Hb_002150_010 Hb_000852_050--Hb_002150_010 Hb_002391_350 Hb_002391_350 Hb_000852_050--Hb_002391_350 Hb_000852_050--Hb_001405_100 Hb_001638_110 Hb_001638_110 Hb_000852_050--Hb_001638_110 Hb_001405_100--Hb_002671_110 Hb_006006_070 Hb_006006_070 Hb_001405_100--Hb_006006_070 Hb_001405_100--Hb_000649_030 Hb_019229_020 Hb_019229_020 Hb_000616_050--Hb_019229_020 Hb_003031_030 Hb_003031_030 Hb_000616_050--Hb_003031_030 Hb_000616_050--Hb_000649_030 Hb_001838_050 Hb_001838_050 Hb_000616_050--Hb_001838_050 Hb_000616_050--Hb_000852_050 Hb_022998_010 Hb_022998_010 Hb_000649_030--Hb_022998_010 Hb_000649_030--Hb_000238_060 Hb_000649_030--Hb_019229_020 Hb_111582_010 Hb_111582_010 Hb_000649_030--Hb_111582_010 Hb_002671_110--Hb_005228_170 Hb_005218_070 Hb_005218_070 Hb_002671_110--Hb_005218_070 Hb_002081_040 Hb_002081_040 Hb_002671_110--Hb_002081_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0182858 9.53682 1.62781 4.0291 0 0.0192988
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0417785 0 0 24.0892 0.882925

CAGE analysis