Hb_000237_170

Information

Type transcription factor
Description TF Family: HB
Location Contig237: 192990-200058
Sequence    

Annotation

kegg
ID rcu:RCOM_1448840
description bel1 homeotic protein, putative
nr
ID XP_012067209.1
description PREDICTED: BEL1-like homeodomain protein 6 [Jatropha curcas]
swissprot
ID O65685
description BEL1-like homeodomain protein 6 OS=Arabidopsis thaliana GN=BLH6 PE=1 SV=1
trembl
ID A0A067LCG1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26767 PE=4 SV=1
Gene Ontology
ID GO:0003677
description bel1-like homeodomain protein 6

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24795: 193052-200023
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000237_170 0.0 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 6 [Jatropha curcas]
2 Hb_001468_040 0.1030126693 - - Uncharacterized protein TCM_024268 [Theobroma cacao]
3 Hb_000753_150 0.115635456 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF5.4 [Jatropha curcas]
4 Hb_000103_230 0.1206137455 - - PREDICTED: chlorophyllase-2, chloroplastic [Jatropha curcas]
5 Hb_000237_160 0.1246180371 - - BEL1-like homeodomain protein 1 [Morus notabilis]
6 Hb_022693_080 0.1249702169 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4 [Jatropha curcas]
7 Hb_011472_050 0.1353827588 - - -
8 Hb_067472_010 0.1361466775 - - Uncharacterized protein TCM_024268 [Theobroma cacao]
9 Hb_116784_020 0.137074145 - - PREDICTED: uncharacterized protein LOC104898613 [Beta vulgaris subsp. vulgaris]
10 Hb_002615_080 0.1373244424 - - PREDICTED: non-specific phospholipase C2 [Jatropha curcas]
11 Hb_002636_070 0.1394661078 - - PREDICTED: putative U-box domain-containing protein 42 [Jatropha curcas]
12 Hb_000787_210 0.1400957203 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000352_060 0.1437901908 - - RNA-directed DNA polymerase [Arachis hypogaea]
14 Hb_002983_090 0.1487921304 - - Altered inheritance of mitochondria protein 32 [Glycine soja]
15 Hb_008461_070 0.1491754078 - - PREDICTED: ethylene-overproduction protein 1 isoform X1 [Jatropha curcas]
16 Hb_000027_230 0.1503584628 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
17 Hb_027337_130 0.152177866 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Jatropha curcas]
18 Hb_000574_320 0.1529552343 - - hypothetical protein CICLE_v10024937mg [Citrus clementina]
19 Hb_002030_050 0.1536606831 - - classical arabinogalactan protein 7 precursor [Jatropha curcas]
20 Hb_001195_250 0.1577599266 - - lrr receptor protein kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000237_170 Hb_000237_170 Hb_001468_040 Hb_001468_040 Hb_000237_170--Hb_001468_040 Hb_000753_150 Hb_000753_150 Hb_000237_170--Hb_000753_150 Hb_000103_230 Hb_000103_230 Hb_000237_170--Hb_000103_230 Hb_000237_160 Hb_000237_160 Hb_000237_170--Hb_000237_160 Hb_022693_080 Hb_022693_080 Hb_000237_170--Hb_022693_080 Hb_011472_050 Hb_011472_050 Hb_000237_170--Hb_011472_050 Hb_067472_010 Hb_067472_010 Hb_001468_040--Hb_067472_010 Hb_116784_020 Hb_116784_020 Hb_001468_040--Hb_116784_020 Hb_001366_260 Hb_001366_260 Hb_001468_040--Hb_001366_260 Hb_004312_020 Hb_004312_020 Hb_001468_040--Hb_004312_020 Hb_002983_090 Hb_002983_090 Hb_001468_040--Hb_002983_090 Hb_143871_010 Hb_143871_010 Hb_000753_150--Hb_143871_010 Hb_031862_120 Hb_031862_120 Hb_000753_150--Hb_031862_120 Hb_000753_150--Hb_000237_160 Hb_001195_250 Hb_001195_250 Hb_000753_150--Hb_001195_250 Hb_000326_080 Hb_000326_080 Hb_000753_150--Hb_000326_080 Hb_000787_210 Hb_000787_210 Hb_000103_230--Hb_000787_210 Hb_001252_030 Hb_001252_030 Hb_000103_230--Hb_001252_030 Hb_020141_030 Hb_020141_030 Hb_000103_230--Hb_020141_030 Hb_000130_140 Hb_000130_140 Hb_000103_230--Hb_000130_140 Hb_000208_270 Hb_000208_270 Hb_000103_230--Hb_000208_270 Hb_003517_090 Hb_003517_090 Hb_000237_160--Hb_003517_090 Hb_000237_160--Hb_002983_090 Hb_003177_090 Hb_003177_090 Hb_000237_160--Hb_003177_090 Hb_000959_010 Hb_000959_010 Hb_000237_160--Hb_000959_010 Hb_004117_320 Hb_004117_320 Hb_022693_080--Hb_004117_320 Hb_005867_050 Hb_005867_050 Hb_022693_080--Hb_005867_050 Hb_000270_640 Hb_000270_640 Hb_022693_080--Hb_000270_640 Hb_004979_080 Hb_004979_080 Hb_022693_080--Hb_004979_080 Hb_004291_050 Hb_004291_050 Hb_022693_080--Hb_004291_050 Hb_019863_050 Hb_019863_050 Hb_022693_080--Hb_019863_050 Hb_010565_030 Hb_010565_030 Hb_011472_050--Hb_010565_030 Hb_005542_010 Hb_005542_010 Hb_011472_050--Hb_005542_010 Hb_011472_050--Hb_067472_010 Hb_011472_050--Hb_001366_260 Hb_000173_110 Hb_000173_110 Hb_011472_050--Hb_000173_110 Hb_009434_060 Hb_009434_060 Hb_011472_050--Hb_009434_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.06074 23.5189 18.4949 21.7237 2.58916 3.11202
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.070325 0.143886 0 11.311 70.1735

CAGE analysis