Hb_000243_010

Information

Type -
Description -
Location Contig243: 436-924
Sequence    

Annotation

kegg
ID vvi:100243711
description uncharacterized LOC100243711
nr
ID XP_012078531.1
description PREDICTED: uncharacterized protein LOC105639166 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LMV6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17346 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000243_010 0.0 - - PREDICTED: uncharacterized protein LOC105639166 [Jatropha curcas]
2 Hb_000175_400 0.1108718229 - - conserved hypothetical protein [Ricinus communis]
3 Hb_025193_050 0.1274705725 - - PREDICTED: uncharacterized protein LOC105647290 isoform X1 [Jatropha curcas]
4 Hb_000152_430 0.1275183856 - - PREDICTED: 40S ribosomal protein S20-1 [Jatropha curcas]
5 Hb_000003_350 0.1283216162 - - hypothetical protein POPTR_1155s00200g, partial [Populus trichocarpa]
6 Hb_000608_420 0.1286442204 - - PREDICTED: endoribonuclease Dicer homolog 2 [Jatropha curcas]
7 Hb_000318_380 0.1302949346 - - PREDICTED: diphthamide biosynthesis protein 3-like [Jatropha curcas]
8 Hb_001629_100 0.1332083794 - - PREDICTED: uncharacterized protein LOC100252136 isoform X2 [Vitis vinifera]
9 Hb_011139_020 0.1333749496 - - Mitochondrial import receptor subunit TOM7-1, putative [Ricinus communis]
10 Hb_004007_100 0.1342612219 - - PREDICTED: 60S ribosomal protein L26-1 [Jatropha curcas]
11 Hb_000193_350 0.1367833913 - - eukaryotic translation initiation factor 5A isoform VI [Hevea brasiliensis]
12 Hb_000089_130 0.1398718429 - - mitochondrial ribosomal protein S16, putative [Ricinus communis]
13 Hb_028486_040 0.1408809194 - - 40S ribosomal protein S14, putative [Ricinus communis]
14 Hb_130291_010 0.1409787459 - - PREDICTED: protein PEROXIN-4 isoform X1 [Jatropha curcas]
15 Hb_098315_120 0.1410898316 - - -
16 Hb_000184_050 0.1419751864 - - NOI, putative [Ricinus communis]
17 Hb_003687_020 0.142114567 - - PREDICTED: 60S ribosomal protein L14-1 [Jatropha curcas]
18 Hb_008173_120 0.1422901804 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000156_130 0.1424651513 - - hypothetical protein JCGZ_04605 [Jatropha curcas]
20 Hb_001840_120 0.1435287353 - - PREDICTED: uncharacterized protein LOC104228746 [Nicotiana sylvestris]

Gene co-expression network

sample Hb_000243_010 Hb_000243_010 Hb_000175_400 Hb_000175_400 Hb_000243_010--Hb_000175_400 Hb_025193_050 Hb_025193_050 Hb_000243_010--Hb_025193_050 Hb_000152_430 Hb_000152_430 Hb_000243_010--Hb_000152_430 Hb_000003_350 Hb_000003_350 Hb_000243_010--Hb_000003_350 Hb_000608_420 Hb_000608_420 Hb_000243_010--Hb_000608_420 Hb_000318_380 Hb_000318_380 Hb_000243_010--Hb_000318_380 Hb_000193_350 Hb_000193_350 Hb_000175_400--Hb_000193_350 Hb_002259_030 Hb_002259_030 Hb_000175_400--Hb_002259_030 Hb_004453_150 Hb_004453_150 Hb_000175_400--Hb_004453_150 Hb_000175_400--Hb_025193_050 Hb_011016_090 Hb_011016_090 Hb_000175_400--Hb_011016_090 Hb_000089_130 Hb_000089_130 Hb_000175_400--Hb_000089_130 Hb_012515_010 Hb_012515_010 Hb_025193_050--Hb_012515_010 Hb_011139_020 Hb_011139_020 Hb_025193_050--Hb_011139_020 Hb_024650_050 Hb_024650_050 Hb_025193_050--Hb_024650_050 Hb_004595_020 Hb_004595_020 Hb_025193_050--Hb_004595_020 Hb_025193_050--Hb_000152_430 Hb_025193_050--Hb_004453_150 Hb_000152_430--Hb_011139_020 Hb_000152_430--Hb_000318_380 Hb_001019_090 Hb_001019_090 Hb_000152_430--Hb_001019_090 Hb_000152_430--Hb_024650_050 Hb_000928_240 Hb_000928_240 Hb_000152_430--Hb_000928_240 Hb_002259_150 Hb_002259_150 Hb_000003_350--Hb_002259_150 Hb_001629_100 Hb_001629_100 Hb_000003_350--Hb_001629_100 Hb_000003_350--Hb_000175_400 Hb_000003_350--Hb_000193_350 Hb_001057_050 Hb_001057_050 Hb_000003_350--Hb_001057_050 Hb_001881_020 Hb_001881_020 Hb_000608_420--Hb_001881_020 Hb_000865_070 Hb_000865_070 Hb_000608_420--Hb_000865_070 Hb_000091_090 Hb_000091_090 Hb_000608_420--Hb_000091_090 Hb_011828_020 Hb_011828_020 Hb_000608_420--Hb_011828_020 Hb_004116_040 Hb_004116_040 Hb_000608_420--Hb_004116_040 Hb_000086_570 Hb_000086_570 Hb_000608_420--Hb_000086_570 Hb_001824_070 Hb_001824_070 Hb_000318_380--Hb_001824_070 Hb_007747_090 Hb_007747_090 Hb_000318_380--Hb_007747_090 Hb_000318_380--Hb_000928_240 Hb_001477_110 Hb_001477_110 Hb_000318_380--Hb_001477_110 Hb_000318_380--Hb_011139_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.72985 4.64569 1.01561 2.66463 17.6655 34.8452
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
25.4764 32.9906 14.7975 11.0267 1.96706

CAGE analysis