Hb_000244_140

Information

Type -
Description -
Location Contig244: 192630-193187
Sequence    

Annotation

kegg
ID rcu:RCOM_1461050
description Pectinesterase inhibitor, putative
nr
ID XP_012079630.1
description PREDICTED: cell wall / vacuolar inhibitor of fructosidase 2 [Jatropha curcas]
swissprot
ID O49603
description Cell wall / vacuolar inhibitor of fructosidase 2 OS=Arabidopsis thaliana GN=C/VIF2 PE=1 SV=1
trembl
ID A0A067KHL6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14938 PE=4 SV=1
Gene Ontology
ID GO:0004857
description cell wall vacuolar inhibitor of fructosidase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_25462: 192843-193401
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000244_140 0.0 - - PREDICTED: cell wall / vacuolar inhibitor of fructosidase 2 [Jatropha curcas]
2 Hb_000092_050 0.139607031 - - PREDICTED: uncharacterized protein LOC105628886 [Jatropha curcas]
3 Hb_080081_010 0.1397160591 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like [Fragaria vesca subsp. vesca]
4 Hb_000577_070 0.145406172 - - -
5 Hb_000172_470 0.1469731972 - - hypothetical protein POPTR_0005s08310g [Populus trichocarpa]
6 Hb_074836_020 0.1746521388 - - unnamed protein product [Vitis vinifera]
7 Hb_005479_050 0.1872537154 - - -
8 Hb_001428_010 0.2005606241 - - PREDICTED: transcription factor PRE1-like [Jatropha curcas]
9 Hb_000156_150 0.2016073129 - - hypothetical protein JCGZ_04603 [Jatropha curcas]
10 Hb_000500_070 0.2069744078 - - hypothetical protein POPTR_0015s12340g [Populus trichocarpa]
11 Hb_104362_010 0.2114468093 - - hypothetical protein POPTR_0247s002302g, partial [Populus trichocarpa]
12 Hb_158296_010 0.2117022909 - - PREDICTED: choline monooxygenase, chloroplastic isoform X3 [Jatropha curcas]
13 Hb_000220_020 0.2170518133 - - hypothetical protein CICLE_v10017575mg [Citrus clementina]
14 Hb_001486_050 0.2186564122 - - PREDICTED: arabinogalactan peptide 13-like [Jatropha curcas]
15 Hb_006816_110 0.2233117521 transcription factor TF Family: HB PREDICTED: homeobox protein knotted-1-like 1 [Jatropha curcas]
16 Hb_000025_220 0.2319524027 - - hypothetical protein POPTR_0001s28080g [Populus trichocarpa]
17 Hb_002681_150 0.2372234095 - - uridine cytidine kinase I, putative [Ricinus communis]
18 Hb_007741_090 0.2383018887 - - Autophagy-related 8f -like protein [Gossypium arboreum]
19 Hb_000175_600 0.2385575991 - - PREDICTED: TATA-binding protein-associated factor 2N isoform X2 [Jatropha curcas]
20 Hb_009803_010 0.2389369485 - - hypothetical protein JCGZ_08257 [Jatropha curcas]

Gene co-expression network

sample Hb_000244_140 Hb_000244_140 Hb_000092_050 Hb_000092_050 Hb_000244_140--Hb_000092_050 Hb_080081_010 Hb_080081_010 Hb_000244_140--Hb_080081_010 Hb_000577_070 Hb_000577_070 Hb_000244_140--Hb_000577_070 Hb_000172_470 Hb_000172_470 Hb_000244_140--Hb_000172_470 Hb_074836_020 Hb_074836_020 Hb_000244_140--Hb_074836_020 Hb_005479_050 Hb_005479_050 Hb_000244_140--Hb_005479_050 Hb_000092_050--Hb_000172_470 Hb_000092_050--Hb_080081_010 Hb_000092_050--Hb_000577_070 Hb_000010_040 Hb_000010_040 Hb_000092_050--Hb_000010_040 Hb_000025_220 Hb_000025_220 Hb_000092_050--Hb_000025_220 Hb_006816_110 Hb_006816_110 Hb_080081_010--Hb_006816_110 Hb_080081_010--Hb_005479_050 Hb_080081_010--Hb_000172_470 Hb_000220_020 Hb_000220_020 Hb_080081_010--Hb_000220_020 Hb_000577_070--Hb_000172_470 Hb_000577_070--Hb_074836_020 Hb_000140_300 Hb_000140_300 Hb_000577_070--Hb_000140_300 Hb_000500_070 Hb_000500_070 Hb_000577_070--Hb_000500_070 Hb_000172_470--Hb_000500_070 Hb_000172_470--Hb_074836_020 Hb_000172_470--Hb_006816_110 Hb_000635_020 Hb_000635_020 Hb_074836_020--Hb_000635_020 Hb_007575_090 Hb_007575_090 Hb_074836_020--Hb_007575_090 Hb_000236_210 Hb_000236_210 Hb_074836_020--Hb_000236_210 Hb_001486_050 Hb_001486_050 Hb_005479_050--Hb_001486_050 Hb_005479_050--Hb_006816_110 Hb_005479_050--Hb_000172_470 Hb_001335_040 Hb_001335_040 Hb_005479_050--Hb_001335_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0483968 0.30556 1.82833 20.7383 0.0454842 3.26819
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.112709 0 0 0.583871 1.01568

CAGE analysis