Hb_000244_290

Information

Type -
Description -
Location Contig244: 301233-304794
Sequence    

Annotation

kegg
ID pop:POPTR_0007s04030g
description POPTRDRAFT_562455; hypothetical protein
nr
ID XP_012087641.1
description PREDICTED: UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 [Jatropha curcas]
swissprot
ID Q9LSB1
description UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 OS=Arabidopsis thaliana GN=GUX1 PE=2 SV=1
trembl
ID A0A067JLN8
description Hexosyltransferase OS=Jatropha curcas GN=JCGZ_25413 PE=3 SV=1
Gene Ontology
ID GO:0005794
description udp-glucuronate:xylan alpha-glucuronosyltransferase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_25483: 301440-304736
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000244_290 0.0 - - PREDICTED: UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 [Jatropha curcas]
2 Hb_011344_110 0.0419974056 transcription factor TF Family: MYB PREDICTED: protein ODORANT1 [Jatropha curcas]
3 Hb_000628_070 0.0573922545 - - -
4 Hb_000243_240 0.0688468695 - - cytochrome P450 family protein [Populus trichocarpa]
5 Hb_000327_350 0.0738293691 - - PREDICTED: 3-ketoacyl-CoA synthase 21-like [Jatropha curcas]
6 Hb_000816_090 0.077801761 transcription factor TF Family: TRAF protein binding protein, putative [Ricinus communis]
7 Hb_001157_120 0.0787043999 - - PREDICTED: dirigent protein 19-like [Jatropha curcas]
8 Hb_001343_060 0.0793199305 - - Cytochrome P450 [Theobroma cacao]
9 Hb_001232_170 0.0802977586 - - sulfate transporter, putative [Ricinus communis]
10 Hb_005396_020 0.0803467413 - - hypothetical protein CICLE_v10033278mg [Citrus clementina]
11 Hb_001712_010 0.0806047044 - - PREDICTED: phosphate transporter PHO1 homolog 1 [Jatropha curcas]
12 Hb_001141_430 0.0806823844 - - hypothetical protein POPTR_0008s15160g [Populus trichocarpa]
13 Hb_014881_020 0.0865779013 - - Protein P21, putative [Ricinus communis]
14 Hb_006018_020 0.0892125907 - - conserved hypothetical protein [Ricinus communis]
15 Hb_003060_020 0.0901413514 - - serine carboxypeptidase, putative [Ricinus communis]
16 Hb_000816_170 0.0907144815 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 15 [Jatropha curcas]
17 Hb_003528_090 0.0946019236 - - Uncharacterized protein TCM_037169 [Theobroma cacao]
18 Hb_001269_430 0.1004115378 - - hypothetical protein JCGZ_04286 [Jatropha curcas]
19 Hb_000991_060 0.1005699341 - - PREDICTED: thaumatin-like protein [Jatropha curcas]
20 Hb_159791_010 0.1013204852 - - PREDICTED: cytochrome P450 84A1 [Jatropha curcas]

Gene co-expression network

sample Hb_000244_290 Hb_000244_290 Hb_011344_110 Hb_011344_110 Hb_000244_290--Hb_011344_110 Hb_000628_070 Hb_000628_070 Hb_000244_290--Hb_000628_070 Hb_000243_240 Hb_000243_240 Hb_000244_290--Hb_000243_240 Hb_000327_350 Hb_000327_350 Hb_000244_290--Hb_000327_350 Hb_000816_090 Hb_000816_090 Hb_000244_290--Hb_000816_090 Hb_001157_120 Hb_001157_120 Hb_000244_290--Hb_001157_120 Hb_001343_060 Hb_001343_060 Hb_011344_110--Hb_001343_060 Hb_011344_110--Hb_000628_070 Hb_014881_020 Hb_014881_020 Hb_011344_110--Hb_014881_020 Hb_001232_170 Hb_001232_170 Hb_011344_110--Hb_001232_170 Hb_006018_020 Hb_006018_020 Hb_011344_110--Hb_006018_020 Hb_000628_070--Hb_001232_170 Hb_000628_070--Hb_006018_020 Hb_001712_010 Hb_001712_010 Hb_000628_070--Hb_001712_010 Hb_005396_020 Hb_005396_020 Hb_000628_070--Hb_005396_020 Hb_000243_240--Hb_001157_120 Hb_000816_170 Hb_000816_170 Hb_000243_240--Hb_000816_170 Hb_001141_430 Hb_001141_430 Hb_000243_240--Hb_001141_430 Hb_000243_240--Hb_001343_060 Hb_000243_240--Hb_011344_110 Hb_000327_350--Hb_000816_090 Hb_003060_020 Hb_003060_020 Hb_000327_350--Hb_003060_020 Hb_000521_030 Hb_000521_030 Hb_000327_350--Hb_000521_030 Hb_003528_090 Hb_003528_090 Hb_000327_350--Hb_003528_090 Hb_000318_500 Hb_000318_500 Hb_000327_350--Hb_000318_500 Hb_000816_090--Hb_003060_020 Hb_006570_170 Hb_006570_170 Hb_000816_090--Hb_006570_170 Hb_000816_090--Hb_005396_020 Hb_000816_090--Hb_003528_090 Hb_001634_050 Hb_001634_050 Hb_000816_090--Hb_001634_050 Hb_001157_120--Hb_003528_090 Hb_001157_120--Hb_003060_020 Hb_001157_120--Hb_000816_170 Hb_001157_120--Hb_005396_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.160215 5.65691 2.52153 127.542 0.16936 0.418589
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0405284 0 0.030312 0.963388 14.6645

CAGE analysis