Hb_000249_070

Information

Type -
Description -
Location Contig249: 68143-68811
Sequence    

Annotation

kegg
ID rcu:RCOM_0150470
description Calcium-binding allergen Ole e, putative
nr
ID XP_012085969.1
description PREDICTED: probable calcium-binding protein CML35 [Jatropha curcas]
swissprot
ID Q9SS31
description Probable calcium-binding protein CML36 OS=Arabidopsis thaliana GN=CML36 PE=2 SV=1
trembl
ID A0A067JTX4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22464 PE=4 SV=1
Gene Ontology
ID GO:0005509
description probable calcium-binding protein cml36

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_25887: 67934-68893
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000249_070 0.0 - - PREDICTED: probable calcium-binding protein CML35 [Jatropha curcas]
2 Hb_002685_110 0.0761061806 - - BTB/POZ domain-containing protein KCTD9, putative [Ricinus communis]
3 Hb_169631_010 0.0950238565 - - MADS-box transcription factor, putative [Ricinus communis]
4 Hb_002235_170 0.0972436001 - - hypothetical protein CISIN_1g010208mg [Citrus sinensis]
5 Hb_002445_120 0.1026487237 - - secretory carrier membrane protein, putative [Ricinus communis]
6 Hb_000107_200 0.1042675874 - - hypothetical protein B456_005G214800 [Gossypium raimondii]
7 Hb_022833_100 0.1051173747 - - PREDICTED: phosphatidate cytidylyltransferase 1 [Jatropha curcas]
8 Hb_001454_130 0.1057504879 - - Xyloglucan 6-xylosyltransferase, putative [Ricinus communis]
9 Hb_000083_250 0.1057990616 - - ring finger protein, putative [Ricinus communis]
10 Hb_004052_040 0.1063449652 - - PREDICTED: putative G3BP-like protein [Jatropha curcas]
11 Hb_003693_070 0.1067685195 - - PREDICTED: S-(hydroxymethyl)glutathione dehydrogenase [Jatropha curcas]
12 Hb_044736_010 0.1070815608 - - ubiquitin-protein ligase, putative [Ricinus communis]
13 Hb_001492_020 0.1073083736 - - PREDICTED: diacylglycerol kinase 3-like [Jatropha curcas]
14 Hb_000808_280 0.1087248388 - - conserved hypothetical protein [Ricinus communis]
15 Hb_007336_010 0.1088938189 - - PREDICTED: F-box protein At1g47056-like [Jatropha curcas]
16 Hb_000603_150 0.1094771205 - - PREDICTED: guanine nucleotide-binding protein alpha-1 subunit [Jatropha curcas]
17 Hb_059480_010 0.1097213589 - - Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis]
18 Hb_008120_010 0.1099803812 - - PREDICTED: polyadenylate-binding protein-interacting protein 9-like [Populus euphratica]
19 Hb_000205_300 0.111537613 - - PREDICTED: uncharacterized protein LOC105647767 [Jatropha curcas]
20 Hb_000167_080 0.1124122182 - - PREDICTED: uncharacterized protein LOC105641103 [Jatropha curcas]

Gene co-expression network

sample Hb_000249_070 Hb_000249_070 Hb_002685_110 Hb_002685_110 Hb_000249_070--Hb_002685_110 Hb_169631_010 Hb_169631_010 Hb_000249_070--Hb_169631_010 Hb_002235_170 Hb_002235_170 Hb_000249_070--Hb_002235_170 Hb_002445_120 Hb_002445_120 Hb_000249_070--Hb_002445_120 Hb_000107_200 Hb_000107_200 Hb_000249_070--Hb_000107_200 Hb_022833_100 Hb_022833_100 Hb_000249_070--Hb_022833_100 Hb_017224_030 Hb_017224_030 Hb_002685_110--Hb_017224_030 Hb_003761_010 Hb_003761_010 Hb_002685_110--Hb_003761_010 Hb_005291_030 Hb_005291_030 Hb_002685_110--Hb_005291_030 Hb_002473_130 Hb_002473_130 Hb_002685_110--Hb_002473_130 Hb_000035_320 Hb_000035_320 Hb_002685_110--Hb_000035_320 Hb_004157_100 Hb_004157_100 Hb_169631_010--Hb_004157_100 Hb_002660_150 Hb_002660_150 Hb_169631_010--Hb_002660_150 Hb_000107_230 Hb_000107_230 Hb_169631_010--Hb_000107_230 Hb_004052_040 Hb_004052_040 Hb_169631_010--Hb_004052_040 Hb_009049_020 Hb_009049_020 Hb_169631_010--Hb_009049_020 Hb_001492_020 Hb_001492_020 Hb_002235_170--Hb_001492_020 Hb_001314_010 Hb_001314_010 Hb_002235_170--Hb_001314_010 Hb_105328_020 Hb_105328_020 Hb_002235_170--Hb_105328_020 Hb_000127_040 Hb_000127_040 Hb_002235_170--Hb_000127_040 Hb_000862_030 Hb_000862_030 Hb_002235_170--Hb_000862_030 Hb_002213_070 Hb_002213_070 Hb_002235_170--Hb_002213_070 Hb_003777_310 Hb_003777_310 Hb_002445_120--Hb_003777_310 Hb_000318_290 Hb_000318_290 Hb_002445_120--Hb_000318_290 Hb_000056_260 Hb_000056_260 Hb_002445_120--Hb_000056_260 Hb_001633_130 Hb_001633_130 Hb_002445_120--Hb_001633_130 Hb_044736_010 Hb_044736_010 Hb_002445_120--Hb_044736_010 Hb_002445_120--Hb_000107_200 Hb_001018_130 Hb_001018_130 Hb_000107_200--Hb_001018_130 Hb_008120_010 Hb_008120_010 Hb_000107_200--Hb_008120_010 Hb_002067_120 Hb_002067_120 Hb_000107_200--Hb_002067_120 Hb_000606_090 Hb_000606_090 Hb_000107_200--Hb_000606_090 Hb_001135_060 Hb_001135_060 Hb_000107_200--Hb_001135_060 Hb_000172_290 Hb_000172_290 Hb_022833_100--Hb_000172_290 Hb_018292_010 Hb_018292_010 Hb_022833_100--Hb_018292_010 Hb_022833_100--Hb_044736_010 Hb_002289_080 Hb_002289_080 Hb_022833_100--Hb_002289_080 Hb_022833_100--Hb_002445_120 Hb_022833_100--Hb_003777_310
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
178.088 99.0826 90.9189 232.502 75.0047 224.914
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
196.751 120.3 130.512 111.72 79.4264

CAGE analysis