Hb_000251_050

Information

Type -
Description -
Location Contig251: 83420-84538
Sequence    

Annotation

kegg
ID pop:POPTR_0001s34490g
description hypothetical protein
nr
ID KDP21207.1
description hypothetical protein JCGZ_21678 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JBS6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21678 PE=4 SV=1
Gene Ontology
ID GO:0005768
description hypothetical protein JCGZ_21678

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 001_J01.ab1: 83288-84074 , 004_C06.ab1: 83288-84089 , 039_G04.ab1: 83288-84084

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000251_050 0.0 - - hypothetical protein JCGZ_21678 [Jatropha curcas]
2 Hb_001269_520 0.1110838146 - - PREDICTED: putative receptor-like protein kinase At1g80870 [Jatropha curcas]
3 Hb_002110_090 0.1205470036 - - PREDICTED: transport inhibitor response 1-like protein [Jatropha curcas]
4 Hb_049293_010 0.1237604121 - - kinase, putative [Ricinus communis]
5 Hb_002099_060 0.1275788129 - - Protein AFR, putative [Ricinus communis]
6 Hb_001195_250 0.1310132364 - - lrr receptor protein kinase, putative [Ricinus communis]
7 Hb_000418_150 0.1363529036 - - ABC transporter family protein [Hevea brasiliensis]
8 Hb_000964_170 0.1378080382 - - Cellulose synthase A catalytic subunit 6 [UDP-forming], putative [Ricinus communis]
9 Hb_000438_020 0.1448963235 - - leucine-rich repeat-containing protein 2, lrrc2, putative [Ricinus communis]
10 Hb_001538_020 0.1473967871 - - PREDICTED: uncharacterized protein LOC105629608 [Jatropha curcas]
11 Hb_003177_090 0.1478563794 - - PREDICTED: filament-like plant protein 4 [Jatropha curcas]
12 Hb_000992_020 0.1522311762 - - monoxygenase, putative [Ricinus communis]
13 Hb_000757_020 0.1522720152 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 2 [Jatropha curcas]
14 Hb_002320_090 0.1574570746 - - PREDICTED: endoglucanase 25-like [Jatropha curcas]
15 Hb_000321_120 0.15848362 - - PREDICTED: probable receptor-like protein kinase At5g59700 [Jatropha curcas]
16 Hb_029748_020 0.1599647261 - - PREDICTED: ent-kaur-16-ene synthase, chloroplastic isoform X1 [Jatropha curcas]
17 Hb_025045_010 0.1601226019 - - catalytic, putative [Ricinus communis]
18 Hb_000906_070 0.1609658584 - - PREDICTED: protein SCAR2-like isoform X1 [Jatropha curcas]
19 Hb_000270_710 0.1620162287 - - PREDICTED: WAT1-related protein At5g40240-like isoform X1 [Jatropha curcas]
20 Hb_000042_060 0.1625306462 - - PREDICTED: uncharacterized protein LOC105632794 [Jatropha curcas]

Gene co-expression network

sample Hb_000251_050 Hb_000251_050 Hb_001269_520 Hb_001269_520 Hb_000251_050--Hb_001269_520 Hb_002110_090 Hb_002110_090 Hb_000251_050--Hb_002110_090 Hb_049293_010 Hb_049293_010 Hb_000251_050--Hb_049293_010 Hb_002099_060 Hb_002099_060 Hb_000251_050--Hb_002099_060 Hb_001195_250 Hb_001195_250 Hb_000251_050--Hb_001195_250 Hb_000418_150 Hb_000418_150 Hb_000251_050--Hb_000418_150 Hb_001269_520--Hb_002110_090 Hb_000417_020 Hb_000417_020 Hb_001269_520--Hb_000417_020 Hb_001538_020 Hb_001538_020 Hb_001269_520--Hb_001538_020 Hb_001269_520--Hb_001195_250 Hb_000270_710 Hb_000270_710 Hb_001269_520--Hb_000270_710 Hb_003177_090 Hb_003177_090 Hb_002110_090--Hb_003177_090 Hb_000107_550 Hb_000107_550 Hb_002110_090--Hb_000107_550 Hb_000181_230 Hb_000181_230 Hb_002110_090--Hb_000181_230 Hb_002110_090--Hb_002099_060 Hb_000757_020 Hb_000757_020 Hb_049293_010--Hb_000757_020 Hb_049293_010--Hb_003177_090 Hb_001195_370 Hb_001195_370 Hb_049293_010--Hb_001195_370 Hb_000366_030 Hb_000366_030 Hb_049293_010--Hb_000366_030 Hb_049293_010--Hb_000418_150 Hb_000438_020 Hb_000438_020 Hb_002099_060--Hb_000438_020 Hb_029748_020 Hb_029748_020 Hb_002099_060--Hb_029748_020 Hb_005724_040 Hb_005724_040 Hb_002099_060--Hb_005724_040 Hb_004864_020 Hb_004864_020 Hb_002099_060--Hb_004864_020 Hb_002099_060--Hb_000181_230 Hb_002099_060--Hb_000418_150 Hb_000103_410 Hb_000103_410 Hb_001195_250--Hb_000103_410 Hb_000753_150 Hb_000753_150 Hb_001195_250--Hb_000753_150 Hb_001195_250--Hb_003177_090 Hb_006717_010 Hb_006717_010 Hb_001195_250--Hb_006717_010 Hb_000418_150--Hb_000438_020 Hb_000418_150--Hb_000757_020 Hb_000418_150--Hb_004864_020 Hb_000418_150--Hb_003177_090 Hb_001496_120 Hb_001496_120 Hb_000418_150--Hb_001496_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.60643 16.5841 10.0289 18.7937 6.63811 3.25887
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.573754 0.347154 0.128676 10.1936 32.1983

CAGE analysis