Hb_000251_120

Information

Type -
Description -
Location Contig251: 151831-170210
Sequence    

Annotation

kegg
ID rcu:RCOM_0634180
description O-acetyltransferase, putative
nr
ID XP_002519732.1
description O-acetyltransferase, putative [Ricinus communis]
swissprot
ID O49726
description Probable purine permease 9 OS=Arabidopsis thaliana GN=PUP9 PE=2 SV=2
trembl
ID B9S163
description O-acetyltransferase, putative OS=Ricinus communis GN=RCOM_0634180 PE=4 SV=1
Gene Ontology
ID GO:0016740
description cas1 domain-containing protein 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_26236: 151690-158885 , PASA_asmbl_26241: 168342-170248
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000251_120 0.0 - - O-acetyltransferase, putative [Ricinus communis]
2 Hb_001001_070 0.0617916952 - - PREDICTED: uncharacterized protein LOC105633663 [Jatropha curcas]
3 Hb_000108_180 0.0809705598 - - PREDICTED: uncharacterized protein LOC105630021 [Jatropha curcas]
4 Hb_000392_540 0.1090927293 - - PREDICTED: hypersensitive-induced response protein 1 [Sesamum indicum]
5 Hb_003177_040 0.1159009147 - - endo-1,4-beta-glucanase, putative [Ricinus communis]
6 Hb_008461_060 0.1220458573 - - hypothetical protein JCGZ_17379 [Jatropha curcas]
7 Hb_001195_380 0.1230106988 - - PREDICTED: uncharacterized protein LOC105633781 [Jatropha curcas]
8 Hb_006750_010 0.1241891737 - - Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis]
9 Hb_001541_060 0.1242254432 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000367_080 0.1259008769 - - PREDICTED: UDP-glucose 6-dehydrogenase 1-like [Jatropha curcas]
11 Hb_002894_080 0.1289266214 - - conserved hypothetical protein [Ricinus communis]
12 Hb_005183_130 0.129672464 - - glycogenin, putative [Ricinus communis]
13 Hb_000176_080 0.1303398418 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g30520 [Jatropha curcas]
14 Hb_003086_030 0.1316749387 - - PREDICTED: fasciclin-like arabinogalactan protein 17 [Jatropha curcas]
15 Hb_000236_230 0.1322611232 - - PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X2 [Jatropha curcas]
16 Hb_002759_030 0.1324666187 - - PREDICTED: serine/threonine-protein kinase PBS1 [Jatropha curcas]
17 Hb_174541_030 0.1392467917 - - Cytochrome P450, family 98, subfamily A, polypeptide 3 [Theobroma cacao]
18 Hb_000030_130 0.1393058558 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
19 Hb_158092_050 0.1432787214 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX10 [Jatropha curcas]
20 Hb_001279_400 0.1438583551 - - PREDICTED: uncharacterized protein LOC105633544 [Jatropha curcas]

Gene co-expression network

sample Hb_000251_120 Hb_000251_120 Hb_001001_070 Hb_001001_070 Hb_000251_120--Hb_001001_070 Hb_000108_180 Hb_000108_180 Hb_000251_120--Hb_000108_180 Hb_000392_540 Hb_000392_540 Hb_000251_120--Hb_000392_540 Hb_003177_040 Hb_003177_040 Hb_000251_120--Hb_003177_040 Hb_008461_060 Hb_008461_060 Hb_000251_120--Hb_008461_060 Hb_001195_380 Hb_001195_380 Hb_000251_120--Hb_001195_380 Hb_001001_070--Hb_008461_060 Hb_001001_070--Hb_000108_180 Hb_001001_070--Hb_003177_040 Hb_002081_020 Hb_002081_020 Hb_001001_070--Hb_002081_020 Hb_002759_030 Hb_002759_030 Hb_001001_070--Hb_002759_030 Hb_000108_180--Hb_003177_040 Hb_001541_060 Hb_001541_060 Hb_000108_180--Hb_001541_060 Hb_000176_080 Hb_000176_080 Hb_000108_180--Hb_000176_080 Hb_005183_130 Hb_005183_130 Hb_000108_180--Hb_005183_130 Hb_010968_030 Hb_010968_030 Hb_000392_540--Hb_010968_030 Hb_011224_150 Hb_011224_150 Hb_000392_540--Hb_011224_150 Hb_000367_080 Hb_000367_080 Hb_000392_540--Hb_000367_080 Hb_004957_050 Hb_004957_050 Hb_000392_540--Hb_004957_050 Hb_002890_110 Hb_002890_110 Hb_000392_540--Hb_002890_110 Hb_000236_290 Hb_000236_290 Hb_003177_040--Hb_000236_290 Hb_003177_040--Hb_008461_060 Hb_001699_080 Hb_001699_080 Hb_003177_040--Hb_001699_080 Hb_002151_070 Hb_002151_070 Hb_008461_060--Hb_002151_070 Hb_001289_070 Hb_001289_070 Hb_008461_060--Hb_001289_070 Hb_008461_060--Hb_002081_020 Hb_158092_050 Hb_158092_050 Hb_008461_060--Hb_158092_050 Hb_000813_070 Hb_000813_070 Hb_008461_060--Hb_000813_070 Hb_000580_110 Hb_000580_110 Hb_001195_380--Hb_000580_110 Hb_006750_010 Hb_006750_010 Hb_001195_380--Hb_006750_010 Hb_001008_080 Hb_001008_080 Hb_001195_380--Hb_001008_080 Hb_002495_030 Hb_002495_030 Hb_001195_380--Hb_002495_030 Hb_002596_080 Hb_002596_080 Hb_001195_380--Hb_002596_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.799229 4.77499 4.91482 41.5049 1.16457 0.847771
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.517196 0.875966 0.849301 3.09497 28.2572

CAGE analysis