Hb_000256_230

Information

Type -
Description -
Location Contig256: 283953-287476
Sequence    

Annotation

kegg
ID rcu:RCOM_0866930
description hypothetical protein
nr
ID XP_012076483.1
description PREDICTED: uncharacterized protein LOC105637594 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KP15
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07125 PE=4 SV=1
Gene Ontology
ID GO:0005768
description hyp o-arabinosyltransferase homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_26709: 284025-287456
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000256_230 0.0 - - PREDICTED: uncharacterized protein LOC105637594 [Jatropha curcas]
2 Hb_000665_170 0.0428158589 - - PREDICTED: probable beta-1,3-galactosyltransferase 10 [Jatropha curcas]
3 Hb_000389_030 0.0484619428 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B [Jatropha curcas]
4 Hb_003209_130 0.0611964532 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
5 Hb_004126_040 0.0639309252 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000622_110 0.0689302956 - - cmp-sialic acid transporter, putative [Ricinus communis]
7 Hb_002486_050 0.0708524653 - - Multiple inositol polyphosphate phosphatase 1 precursor, putative [Ricinus communis]
8 Hb_000418_020 0.0719637994 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
9 Hb_003777_030 0.0755638432 - - Exocyst complex component, putative [Ricinus communis]
10 Hb_010672_020 0.0783976072 - - PREDICTED: ATP synthase gamma chain, chloroplastic-like [Jatropha curcas]
11 Hb_000035_220 0.0806532421 - - PREDICTED: transmembrane 9 superfamily member 8 [Jatropha curcas]
12 Hb_001021_010 0.0830831259 - - PREDICTED: bifunctional protein FolD 2 [Jatropha curcas]
13 Hb_001250_050 0.0831013254 - - PREDICTED: uncharacterized protein LOC105644623 isoform X1 [Jatropha curcas]
14 Hb_003878_200 0.0842513104 - - PREDICTED: V-type proton ATPase subunit D-like [Jatropha curcas]
15 Hb_014361_060 0.0846701387 - - PREDICTED: probable prolyl 4-hydroxylase 9 [Jatropha curcas]
16 Hb_004525_040 0.0848607481 - - PREDICTED: sugar transporter ERD6-like 6 [Jatropha curcas]
17 Hb_005062_110 0.086410412 - - PREDICTED: transmembrane 9 superfamily member 1 [Jatropha curcas]
18 Hb_021576_070 0.0870412576 - - hypothetical protein PRUPE_ppa002736mg [Prunus persica]
19 Hb_011310_110 0.0880304748 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g25400 isoform X1 [Jatropha curcas]
20 Hb_007545_010 0.0891480924 - - HIV-1 rev binding protein, hrbl, putative [Ricinus communis]

Gene co-expression network

sample Hb_000256_230 Hb_000256_230 Hb_000665_170 Hb_000665_170 Hb_000256_230--Hb_000665_170 Hb_000389_030 Hb_000389_030 Hb_000256_230--Hb_000389_030 Hb_003209_130 Hb_003209_130 Hb_000256_230--Hb_003209_130 Hb_004126_040 Hb_004126_040 Hb_000256_230--Hb_004126_040 Hb_000622_110 Hb_000622_110 Hb_000256_230--Hb_000622_110 Hb_002486_050 Hb_002486_050 Hb_000256_230--Hb_002486_050 Hb_003777_030 Hb_003777_030 Hb_000665_170--Hb_003777_030 Hb_010672_020 Hb_010672_020 Hb_000665_170--Hb_010672_020 Hb_000665_170--Hb_003209_130 Hb_007545_010 Hb_007545_010 Hb_000665_170--Hb_007545_010 Hb_000665_170--Hb_000389_030 Hb_001021_010 Hb_001021_010 Hb_000389_030--Hb_001021_010 Hb_000389_030--Hb_004126_040 Hb_004525_040 Hb_004525_040 Hb_000389_030--Hb_004525_040 Hb_000009_060 Hb_000009_060 Hb_000389_030--Hb_000009_060 Hb_003209_130--Hb_002486_050 Hb_005535_080 Hb_005535_080 Hb_003209_130--Hb_005535_080 Hb_003209_130--Hb_000622_110 Hb_003209_130--Hb_004126_040 Hb_004126_040--Hb_000665_170 Hb_004126_040--Hb_000622_110 Hb_003878_200 Hb_003878_200 Hb_004126_040--Hb_003878_200 Hb_005062_110 Hb_005062_110 Hb_000622_110--Hb_005062_110 Hb_000622_110--Hb_002486_050 Hb_000926_340 Hb_000926_340 Hb_000622_110--Hb_000926_340 Hb_086639_080 Hb_086639_080 Hb_000622_110--Hb_086639_080 Hb_002486_050--Hb_005062_110 Hb_002486_050--Hb_000665_170 Hb_000085_260 Hb_000085_260 Hb_002486_050--Hb_000085_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.3673 23.6972 39.5097 79.2877 18.4321 19.4682
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
17.439 14.932 15.8129 34.2747 37.6479

CAGE analysis