Hb_000258_070

Information

Type -
Description -
Location Contig258: 35661-42364
Sequence    

Annotation

kegg
ID rcu:RCOM_1057750
description hypothetical protein
nr
ID XP_012091047.1
description PREDICTED: uncharacterized protein LOC105649104 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JDD1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00653 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_26793: 35998-42356
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000258_070 0.0 - - PREDICTED: uncharacterized protein LOC105649104 [Jatropha curcas]
2 Hb_000441_090 0.0512305375 - - PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit 2 [Jatropha curcas]
3 Hb_015807_050 0.0552153577 - - PREDICTED: uncharacterized protein LOC105632878 [Jatropha curcas]
4 Hb_002849_130 0.0570037646 - - PREDICTED: RAB6A-GEF complex partner protein 1-like [Jatropha curcas]
5 Hb_000340_530 0.060932849 - - hypothetical protein VITISV_016664 [Vitis vinifera]
6 Hb_000313_220 0.0615774455 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
7 Hb_000347_430 0.0618165918 - - PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-A [Jatropha curcas]
8 Hb_000116_450 0.0643643628 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 1 [Jatropha curcas]
9 Hb_000976_140 0.0649312325 - - PREDICTED: uncharacterized protein LOC105646208 isoform X1 [Jatropha curcas]
10 Hb_002374_370 0.0683039007 - - protein with unknown function [Ricinus communis]
11 Hb_002989_020 0.0691905091 - - PREDICTED: uncharacterized protein LOC105630013 isoform X2 [Jatropha curcas]
12 Hb_001902_030 0.0707884665 - - PREDICTED: SKP1-like protein 21 isoform X1 [Jatropha curcas]
13 Hb_003517_040 0.0718078869 - - PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic [Jatropha curcas]
14 Hb_005730_040 0.0737865893 - - hypothetical protein PRUPE_ppa004338mg [Prunus persica]
15 Hb_001922_150 0.0738116907 - - PREDICTED: WD repeat-containing protein 91 homolog isoform X1 [Jatropha curcas]
16 Hb_000300_270 0.0746887503 - - cationic amino acid transporter, putative [Ricinus communis]
17 Hb_004109_080 0.074845747 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like isoform X1 [Populus euphratica]
18 Hb_002263_020 0.074950598 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 11-like [Jatropha curcas]
19 Hb_001009_320 0.0757821811 - - PREDICTED: uncharacterized protein LOC105640250 [Jatropha curcas]
20 Hb_006658_020 0.0773014418 - - PREDICTED: uncharacterized protein LOC105633529 [Jatropha curcas]

Gene co-expression network

sample Hb_000258_070 Hb_000258_070 Hb_000441_090 Hb_000441_090 Hb_000258_070--Hb_000441_090 Hb_015807_050 Hb_015807_050 Hb_000258_070--Hb_015807_050 Hb_002849_130 Hb_002849_130 Hb_000258_070--Hb_002849_130 Hb_000340_530 Hb_000340_530 Hb_000258_070--Hb_000340_530 Hb_000313_220 Hb_000313_220 Hb_000258_070--Hb_000313_220 Hb_000347_430 Hb_000347_430 Hb_000258_070--Hb_000347_430 Hb_003517_040 Hb_003517_040 Hb_000441_090--Hb_003517_040 Hb_000317_100 Hb_000317_100 Hb_000441_090--Hb_000317_100 Hb_005215_010 Hb_005215_010 Hb_000441_090--Hb_005215_010 Hb_002027_080 Hb_002027_080 Hb_000441_090--Hb_002027_080 Hb_003040_050 Hb_003040_050 Hb_000441_090--Hb_003040_050 Hb_015807_050--Hb_000313_220 Hb_000976_140 Hb_000976_140 Hb_015807_050--Hb_000976_140 Hb_109980_010 Hb_109980_010 Hb_015807_050--Hb_109980_010 Hb_000035_470 Hb_000035_470 Hb_015807_050--Hb_000035_470 Hb_015807_050--Hb_002849_130 Hb_002849_130--Hb_000313_220 Hb_002849_130--Hb_000976_140 Hb_005730_040 Hb_005730_040 Hb_002849_130--Hb_005730_040 Hb_093458_040 Hb_093458_040 Hb_002849_130--Hb_093458_040 Hb_003428_010 Hb_003428_010 Hb_002849_130--Hb_003428_010 Hb_002989_020 Hb_002989_020 Hb_000340_530--Hb_002989_020 Hb_011063_050 Hb_011063_050 Hb_000340_530--Hb_011063_050 Hb_000340_530--Hb_093458_040 Hb_001679_050 Hb_001679_050 Hb_000340_530--Hb_001679_050 Hb_000116_450 Hb_000116_450 Hb_000340_530--Hb_000116_450 Hb_004109_080 Hb_004109_080 Hb_000340_530--Hb_004109_080 Hb_000313_220--Hb_000976_140 Hb_001959_110 Hb_001959_110 Hb_000313_220--Hb_001959_110 Hb_004452_110 Hb_004452_110 Hb_000313_220--Hb_004452_110 Hb_000313_220--Hb_005730_040 Hb_000406_200 Hb_000406_200 Hb_000347_430--Hb_000406_200 Hb_000363_310 Hb_000363_310 Hb_000347_430--Hb_000363_310 Hb_000138_100 Hb_000138_100 Hb_000347_430--Hb_000138_100 Hb_000347_430--Hb_003517_040 Hb_001021_150 Hb_001021_150 Hb_000347_430--Hb_001021_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.37958 11.333 11.0999 16.3401 13.2462 11.7888
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.76239 11.5878 9.06711 9.55517 15.1373

CAGE analysis