Hb_000258_110

Information

Type -
Description -
Location Contig258: 104976-110146
Sequence    

Annotation

kegg
ID rcu:RCOM_0836420
description adenosine diphosphatase, putative (EC:3.6.1.5)
nr
ID XP_012067642.1
description PREDICTED: probable apyrase 6 isoform X1 [Jatropha curcas]
swissprot
ID O80612
description Probable apyrase 6 OS=Arabidopsis thaliana GN=APY6 PE=2 SV=2
trembl
ID A0A067L9Q3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15607 PE=4 SV=1
Gene Ontology
ID GO:0016787
description probable apyrase 6 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_26797: 105271-110061
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000258_110 0.0 - - PREDICTED: probable apyrase 6 isoform X1 [Jatropha curcas]
2 Hb_001141_310 0.0538668065 - - PREDICTED: uncharacterized protein LOC105632212 [Jatropha curcas]
3 Hb_000836_460 0.0604621288 - - PREDICTED: uncharacterized protein LOC105628435 [Jatropha curcas]
4 Hb_086063_020 0.0632853528 transcription factor TF Family: SNF2 PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Jatropha curcas]
5 Hb_000238_030 0.0637221542 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_000215_300 0.0637330559 - - mitochondrial processing peptidase alpha subunit, putative [Ricinus communis]
7 Hb_004037_020 0.0657380463 - - PREDICTED: uncharacterized protein LOC105632366 isoform X1 [Jatropha curcas]
8 Hb_000062_270 0.0726406036 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-1-like isoform X1 [Jatropha curcas]
9 Hb_000345_160 0.0759971406 - - PREDICTED: acyl-CoA-binding domain-containing protein 4-like [Jatropha curcas]
10 Hb_141069_010 0.0762198484 - - conserved hypothetical protein [Ricinus communis]
11 Hb_005797_010 0.0778286646 - - PREDICTED: lysophospholipid acyltransferase 1-like [Jatropha curcas]
12 Hb_000170_090 0.0783012959 - - PREDICTED: UDP-sugar pyrophosphorylase [Jatropha curcas]
13 Hb_188063_050 0.0783144119 - - PREDICTED: putative G3BP-like protein [Jatropha curcas]
14 Hb_000120_280 0.0792159553 - - PREDICTED: protein transport protein SEC23 [Jatropha curcas]
15 Hb_002728_080 0.0811043672 - - WD-repeat protein, putative [Ricinus communis]
16 Hb_004705_170 0.0833045079 - - PREDICTED: ubiquitin thioesterase otubain-like [Jatropha curcas]
17 Hb_000085_450 0.0844759052 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 20 [Jatropha curcas]
18 Hb_039946_050 0.0857911645 - - catalytic, putative [Ricinus communis]
19 Hb_003020_100 0.0864532812 - - PREDICTED: transcription initiation factor IIA large subunit [Jatropha curcas]
20 Hb_102698_010 0.0868641761 - - PREDICTED: vacuolar cation/proton exchanger 5-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000258_110 Hb_000258_110 Hb_001141_310 Hb_001141_310 Hb_000258_110--Hb_001141_310 Hb_000836_460 Hb_000836_460 Hb_000258_110--Hb_000836_460 Hb_086063_020 Hb_086063_020 Hb_000258_110--Hb_086063_020 Hb_000238_030 Hb_000238_030 Hb_000258_110--Hb_000238_030 Hb_000215_300 Hb_000215_300 Hb_000258_110--Hb_000215_300 Hb_004037_020 Hb_004037_020 Hb_000258_110--Hb_004037_020 Hb_015026_130 Hb_015026_130 Hb_001141_310--Hb_015026_130 Hb_121089_030 Hb_121089_030 Hb_001141_310--Hb_121089_030 Hb_001141_310--Hb_086063_020 Hb_188063_050 Hb_188063_050 Hb_001141_310--Hb_188063_050 Hb_001552_030 Hb_001552_030 Hb_001141_310--Hb_001552_030 Hb_003544_060 Hb_003544_060 Hb_000836_460--Hb_003544_060 Hb_004586_220 Hb_004586_220 Hb_000836_460--Hb_004586_220 Hb_005634_010 Hb_005634_010 Hb_000836_460--Hb_005634_010 Hb_003020_100 Hb_003020_100 Hb_000836_460--Hb_003020_100 Hb_000329_060 Hb_000329_060 Hb_000836_460--Hb_000329_060 Hb_086063_020--Hb_000215_300 Hb_086063_020--Hb_004037_020 Hb_001405_210 Hb_001405_210 Hb_086063_020--Hb_001405_210 Hb_000702_090 Hb_000702_090 Hb_086063_020--Hb_000702_090 Hb_016172_030 Hb_016172_030 Hb_086063_020--Hb_016172_030 Hb_001442_060 Hb_001442_060 Hb_000238_030--Hb_001442_060 Hb_000001_170 Hb_000001_170 Hb_000238_030--Hb_000001_170 Hb_102698_010 Hb_102698_010 Hb_000238_030--Hb_102698_010 Hb_012733_070 Hb_012733_070 Hb_000238_030--Hb_012733_070 Hb_000238_030--Hb_086063_020 Hb_004705_170 Hb_004705_170 Hb_000215_300--Hb_004705_170 Hb_000345_160 Hb_000345_160 Hb_000215_300--Hb_000345_160 Hb_000215_300--Hb_004037_020 Hb_007472_070 Hb_007472_070 Hb_000215_300--Hb_007472_070 Hb_004037_020--Hb_016172_030 Hb_004037_020--Hb_000345_160 Hb_001481_060 Hb_001481_060 Hb_004037_020--Hb_001481_060 Hb_000317_100 Hb_000317_100 Hb_004037_020--Hb_000317_100 Hb_004037_020--Hb_004705_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.82051 10.8391 11.0216 16.1993 9.47633 8.78764
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.365 5.20884 5.84453 14.3224 9.75561

CAGE analysis