Hb_000260_700

Information

Type -
Description -
Location Contig260: 534802-536364
Sequence    

Annotation

kegg
ID rcu:RCOM_1324460
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_012090926.1
description PREDICTED: cytochrome P450 89A2-like [Jatropha curcas]
swissprot
ID Q42602
description Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2
trembl
ID A0A067JD97
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00574 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 89a2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27051: 534670-536470
cDNA
(Sanger)
(ID:Location)		 024_B06.ab1: 535582-536302 , 028_D03.ab1: 535682-536302 , 032_M05.ab1: 535715-536470

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000260_700 0.0 - - PREDICTED: cytochrome P450 89A2-like [Jatropha curcas]
2 Hb_000320_440 0.0749515473 - - PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4 isoform X1 [Jatropha curcas]
3 Hb_000088_180 0.0801487908 - - hypothetical protein JCGZ_11198 [Jatropha curcas]
4 Hb_000172_530 0.1059859038 - - PREDICTED: UBP1-associated protein 2B-like isoform X1 [Jatropha curcas]
5 Hb_001776_080 0.1078393565 - - PREDICTED: CAX-interacting protein 4 [Jatropha curcas]
6 Hb_012654_020 0.1123602042 - - conserved hypothetical protein [Ricinus communis]
7 Hb_005016_030 0.1144740792 - - hypothetical protein JCGZ_16549 [Jatropha curcas]
8 Hb_006173_020 0.1156315085 - - PREDICTED: uncharacterized protein At2g39795, mitochondrial-like [Jatropha curcas]
9 Hb_005410_010 0.1165637062 transcription factor TF Family: HSF hypothetical protein JCGZ_07655 [Jatropha curcas]
10 Hb_009615_110 0.1171560671 - - PREDICTED: PAX3- and PAX7-binding protein 1 [Jatropha curcas]
11 Hb_003777_220 0.1173726202 transcription factor TF Family: SET PREDICTED: protein SET DOMAIN GROUP 41 isoform X1 [Jatropha curcas]
12 Hb_002149_040 0.1187625112 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000015_010 0.120603513 - - -
14 Hb_002235_360 0.1213182152 - - PREDICTED: pentatricopeptide repeat-containing protein At5g39680 [Jatropha curcas]
15 Hb_000185_090 0.1225197116 desease resistance Gene Name: CDC48_N PREDICTED: cell division cycle protein 48 homolog [Jatropha curcas]
16 Hb_000050_120 0.1251241287 - - PREDICTED: uncharacterized protein LOC105630790 [Jatropha curcas]
17 Hb_012807_120 0.126699626 - - metal ion binding protein, putative [Ricinus communis]
18 Hb_000365_350 0.1268639546 - - PREDICTED: uncharacterized protein LOC105649068 [Jatropha curcas]
19 Hb_000327_240 0.1275250552 - - PREDICTED: interaptin-like [Jatropha curcas]
20 Hb_160818_010 0.1276769186 - - -

Gene co-expression network

sample Hb_000260_700 Hb_000260_700 Hb_000320_440 Hb_000320_440 Hb_000260_700--Hb_000320_440 Hb_000088_180 Hb_000088_180 Hb_000260_700--Hb_000088_180 Hb_000172_530 Hb_000172_530 Hb_000260_700--Hb_000172_530 Hb_001776_080 Hb_001776_080 Hb_000260_700--Hb_001776_080 Hb_012654_020 Hb_012654_020 Hb_000260_700--Hb_012654_020 Hb_005016_030 Hb_005016_030 Hb_000260_700--Hb_005016_030 Hb_000320_440--Hb_001776_080 Hb_000320_440--Hb_000088_180 Hb_000320_440--Hb_000172_530 Hb_009615_110 Hb_009615_110 Hb_000320_440--Hb_009615_110 Hb_003777_220 Hb_003777_220 Hb_000320_440--Hb_003777_220 Hb_004032_460 Hb_004032_460 Hb_000088_180--Hb_004032_460 Hb_000365_350 Hb_000365_350 Hb_000088_180--Hb_000365_350 Hb_000088_180--Hb_001776_080 Hb_000173_370 Hb_000173_370 Hb_000088_180--Hb_000173_370 Hb_001523_010 Hb_001523_010 Hb_000172_530--Hb_001523_010 Hb_001846_080 Hb_001846_080 Hb_000172_530--Hb_001846_080 Hb_006478_070 Hb_006478_070 Hb_000172_530--Hb_006478_070 Hb_000466_060 Hb_000466_060 Hb_000172_530--Hb_000466_060 Hb_000172_530--Hb_005016_030 Hb_000176_140 Hb_000176_140 Hb_001776_080--Hb_000176_140 Hb_160818_010 Hb_160818_010 Hb_001776_080--Hb_160818_010 Hb_002149_040 Hb_002149_040 Hb_001776_080--Hb_002149_040 Hb_000179_250 Hb_000179_250 Hb_001776_080--Hb_000179_250 Hb_011316_030 Hb_011316_030 Hb_001776_080--Hb_011316_030 Hb_002172_030 Hb_002172_030 Hb_012654_020--Hb_002172_030 Hb_005410_010 Hb_005410_010 Hb_012654_020--Hb_005410_010 Hb_011609_190 Hb_011609_190 Hb_012654_020--Hb_011609_190 Hb_002078_040 Hb_002078_040 Hb_012654_020--Hb_002078_040 Hb_012654_020--Hb_001776_080 Hb_000050_120 Hb_000050_120 Hb_012654_020--Hb_000050_120 Hb_001178_060 Hb_001178_060 Hb_005016_030--Hb_001178_060 Hb_000322_170 Hb_000322_170 Hb_005016_030--Hb_000322_170 Hb_005016_030--Hb_002149_040 Hb_006173_020 Hb_006173_020 Hb_005016_030--Hb_006173_020 Hb_005016_030--Hb_000320_440 Hb_001016_060 Hb_001016_060 Hb_005016_030--Hb_001016_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
785.698 178.785 6.96526 44.7498 852.331 849.688
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
396.368 228.501 231.83 56.8642 119.047

CAGE analysis