Hb_000261_210

Information

Type -
Description -
Location Contig261: 157173-163513
Sequence    

Annotation

kegg
ID rcu:RCOM_1018600
description hypothetical protein
nr
ID XP_012071116.1
description PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
swissprot
ID Q8W486
description Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1
trembl
ID A0A067KT11
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01108 PE=4 SV=1
Gene Ontology
ID GO:0005768
description o-fucosyltransferase family protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27260: 157131-163543 , PASA_asmbl_27261: 157103-162420 , PASA_asmbl_27262: 162429-162705
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000261_210 0.0 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
2 Hb_002473_050 0.0527707774 - - catalytic, putative [Ricinus communis]
3 Hb_000054_040 0.0604203804 - - PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 [Jatropha curcas]
4 Hb_001002_060 0.0663746619 - - PREDICTED: putative GPI-anchor transamidase [Jatropha curcas]
5 Hb_025668_010 0.0760334188 - - unnamed protein product [Coffea canephora]
6 Hb_002351_030 0.0774945071 - - catalytic, putative [Ricinus communis]
7 Hb_000371_090 0.0784089616 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit-like [Jatropha curcas]
8 Hb_000056_160 0.0794606769 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Jatropha curcas]
9 Hb_030982_010 0.0842077304 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000903_010 0.0858824488 - - hypothetical protein JCGZ_23825 [Jatropha curcas]
11 Hb_000154_050 0.0861645673 - - CMP-sialic acid transporter, putative [Ricinus communis]
12 Hb_004064_040 0.0880827092 - - PREDICTED: Down syndrome critical region protein 3 homolog isoform X3 [Jatropha curcas]
13 Hb_023313_040 0.0884564908 - - PREDICTED: uncharacterized protein LOC105640827 isoform X2 [Jatropha curcas]
14 Hb_000184_070 0.0901350835 - - PREDICTED: uncharacterized protein LOC105641537 isoform X1 [Jatropha curcas]
15 Hb_004096_060 0.0910256192 - - PREDICTED: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X2 [Jatropha curcas]
16 Hb_005064_010 0.0912200059 - - PREDICTED: kelch repeat-containing protein At3g27220-like [Jatropha curcas]
17 Hb_016347_020 0.0914162605 - - PREDICTED: D-amino-acid transaminase, chloroplastic-like isoform X1 [Populus euphratica]
18 Hb_000320_290 0.0916828306 - - PREDICTED: putative lactoylglutathione lyase [Jatropha curcas]
19 Hb_000497_190 0.0924929964 - - sterol isomerase, putative [Ricinus communis]
20 Hb_002837_040 0.0935390996 - - Transmembrane emp24 domain-containing protein 10 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000261_210 Hb_000261_210 Hb_002473_050 Hb_002473_050 Hb_000261_210--Hb_002473_050 Hb_000054_040 Hb_000054_040 Hb_000261_210--Hb_000054_040 Hb_001002_060 Hb_001002_060 Hb_000261_210--Hb_001002_060 Hb_025668_010 Hb_025668_010 Hb_000261_210--Hb_025668_010 Hb_002351_030 Hb_002351_030 Hb_000261_210--Hb_002351_030 Hb_000371_090 Hb_000371_090 Hb_000261_210--Hb_000371_090 Hb_002473_050--Hb_000054_040 Hb_002473_050--Hb_025668_010 Hb_000101_080 Hb_000101_080 Hb_002473_050--Hb_000101_080 Hb_007982_030 Hb_007982_030 Hb_002473_050--Hb_007982_030 Hb_002473_050--Hb_002351_030 Hb_000503_020 Hb_000503_020 Hb_000054_040--Hb_000503_020 Hb_000320_290 Hb_000320_290 Hb_000054_040--Hb_000320_290 Hb_001246_130 Hb_001246_130 Hb_000054_040--Hb_001246_130 Hb_005062_110 Hb_005062_110 Hb_000054_040--Hb_005062_110 Hb_023313_040 Hb_023313_040 Hb_001002_060--Hb_023313_040 Hb_000362_170 Hb_000362_170 Hb_001002_060--Hb_000362_170 Hb_000737_030 Hb_000737_030 Hb_001002_060--Hb_000737_030 Hb_001002_060--Hb_025668_010 Hb_005895_010 Hb_005895_010 Hb_001002_060--Hb_005895_010 Hb_025668_010--Hb_023313_040 Hb_004096_060 Hb_004096_060 Hb_025668_010--Hb_004096_060 Hb_005730_010 Hb_005730_010 Hb_025668_010--Hb_005730_010 Hb_002942_210 Hb_002942_210 Hb_025668_010--Hb_002942_210 Hb_002351_030--Hb_001002_060 Hb_002351_030--Hb_000371_090 Hb_001227_130 Hb_001227_130 Hb_002351_030--Hb_001227_130 Hb_003119_090 Hb_003119_090 Hb_002351_030--Hb_003119_090 Hb_001252_090 Hb_001252_090 Hb_002351_030--Hb_001252_090 Hb_003998_040 Hb_003998_040 Hb_000371_090--Hb_003998_040 Hb_000184_070 Hb_000184_070 Hb_000371_090--Hb_000184_070 Hb_011214_160 Hb_011214_160 Hb_000371_090--Hb_011214_160 Hb_000066_030 Hb_000066_030 Hb_000371_090--Hb_000066_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.507 10.9219 26.9125 30.8315 19.8155 13.816
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.79151 6.84892 10.5471 16.4458 16.2527

CAGE analysis