Hb_000261_400

Information

Type -
Description -
Location Contig261: 345685-358741
Sequence    

Annotation

kegg
ID rcu:RCOM_1019530
description ankyrin repeat-containing protein, putative
nr
ID KDP39368.1
description hypothetical protein JCGZ_01125 [Jatropha curcas]
swissprot
ID Q9C7A2
description Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana GN=At3g12360 PE=2 SV=1
trembl
ID A0A067KWK9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01125 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27307: 350805-351613 , PASA_asmbl_27308: 351966-352271 , PASA_asmbl_27309: 352661-352937
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000261_400 0.0 - - hypothetical protein JCGZ_01125 [Jatropha curcas]
2 Hb_003053_050 0.1392672992 - - PREDICTED: putative phospholipid-transporting ATPase 8 [Jatropha curcas]
3 Hb_005799_020 0.1526517089 - - PREDICTED: bidirectional sugar transporter SWEET6b [Jatropha curcas]
4 Hb_000031_230 0.1557133083 - - PREDICTED: probable cyclic nucleotide-gated ion channel 14 isoform X1 [Jatropha curcas]
5 Hb_001221_200 0.187601929 - - -
6 Hb_008092_060 0.1878668695 - - -
7 Hb_001087_010 0.1918943293 - - PREDICTED: uncharacterized protein LOC105630042 [Jatropha curcas]
8 Hb_002636_040 0.1936887901 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH49 isoform X1 [Jatropha curcas]
9 Hb_000505_080 0.19403186 - - Inner membrane transport protein yjjL, putative [Ricinus communis]
10 Hb_000815_230 0.1972364099 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001213_040 0.1997188156 - - fructose-1,6-bisphosphatase, putative [Ricinus communis]
12 Hb_000997_100 0.2007389518 - - PREDICTED: uncharacterized protein LOC105632094 isoform X2 [Jatropha curcas]
13 Hb_001408_030 0.2011870289 - - PREDICTED: stromal 70 kDa heat shock-related protein, chloroplastic [Jatropha curcas]
14 Hb_000395_090 0.2020543697 - - PREDICTED: uncharacterized protein LOC105645572 [Jatropha curcas]
15 Hb_001675_050 0.202219543 - - PREDICTED: uncharacterized protein LOC105635000 [Jatropha curcas]
16 Hb_005063_080 0.2056353954 - - PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Jatropha curcas]
17 Hb_006422_020 0.2066083366 - - PREDICTED: uncharacterized protein LOC105649338 [Jatropha curcas]
18 Hb_007317_090 0.2073096951 - - PREDICTED: glucan endo-1,3-beta-glucosidase 14 [Jatropha curcas]
19 Hb_010344_030 0.2083320525 - - conserved hypothetical protein [Ricinus communis]
20 Hb_008092_050 0.2112921876 - - PREDICTED: uncharacterized protein LOC105142434 [Populus euphratica]

Gene co-expression network

sample Hb_000261_400 Hb_000261_400 Hb_003053_050 Hb_003053_050 Hb_000261_400--Hb_003053_050 Hb_005799_020 Hb_005799_020 Hb_000261_400--Hb_005799_020 Hb_000031_230 Hb_000031_230 Hb_000261_400--Hb_000031_230 Hb_001221_200 Hb_001221_200 Hb_000261_400--Hb_001221_200 Hb_008092_060 Hb_008092_060 Hb_000261_400--Hb_008092_060 Hb_001087_010 Hb_001087_010 Hb_000261_400--Hb_001087_010 Hb_003053_050--Hb_000031_230 Hb_010344_030 Hb_010344_030 Hb_003053_050--Hb_010344_030 Hb_000815_230 Hb_000815_230 Hb_003053_050--Hb_000815_230 Hb_000997_100 Hb_000997_100 Hb_003053_050--Hb_000997_100 Hb_002053_050 Hb_002053_050 Hb_003053_050--Hb_002053_050 Hb_000336_200 Hb_000336_200 Hb_003053_050--Hb_000336_200 Hb_005799_020--Hb_003053_050 Hb_006629_020 Hb_006629_020 Hb_005799_020--Hb_006629_020 Hb_000964_170 Hb_000964_170 Hb_005799_020--Hb_000964_170 Hb_005799_020--Hb_000031_230 Hb_057796_010 Hb_057796_010 Hb_005799_020--Hb_057796_010 Hb_000031_230--Hb_000997_100 Hb_007192_090 Hb_007192_090 Hb_000031_230--Hb_007192_090 Hb_000031_230--Hb_008092_060 Hb_001250_020 Hb_001250_020 Hb_000031_230--Hb_001250_020 Hb_001408_030 Hb_001408_030 Hb_000031_230--Hb_001408_030 Hb_000866_340 Hb_000866_340 Hb_001221_200--Hb_000866_340 Hb_181838_010 Hb_181838_010 Hb_001221_200--Hb_181838_010 Hb_001221_190 Hb_001221_190 Hb_001221_200--Hb_001221_190 Hb_000977_290 Hb_000977_290 Hb_001221_200--Hb_000977_290 Hb_005063_080 Hb_005063_080 Hb_001221_200--Hb_005063_080 Hb_008092_060--Hb_001408_030 Hb_008092_050 Hb_008092_050 Hb_008092_060--Hb_008092_050 Hb_001437_120 Hb_001437_120 Hb_008092_060--Hb_001437_120 Hb_008092_060--Hb_007192_090 Hb_002276_070 Hb_002276_070 Hb_008092_060--Hb_002276_070 Hb_000906_070 Hb_000906_070 Hb_001087_010--Hb_000906_070 Hb_000992_020 Hb_000992_020 Hb_001087_010--Hb_000992_020 Hb_010984_010 Hb_010984_010 Hb_001087_010--Hb_010984_010 Hb_000803_220 Hb_000803_220 Hb_001087_010--Hb_000803_220 Hb_007894_190 Hb_007894_190 Hb_001087_010--Hb_007894_190 Hb_000359_220 Hb_000359_220 Hb_001087_010--Hb_000359_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.077903 0.26924 0.380564 0.464978 0.162331 0.53658
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.03673 0.0173441 0.0445841 0.0571708 1.2441

CAGE analysis