Hb_000264_160

Information

Type -
Description -
Location Contig264: 145388-147645
Sequence    

Annotation

kegg
ID rcu:RCOM_0935950
description hypothetical protein
nr
ID XP_012091577.1
description PREDICTED: CBS domain-containing protein CBSX5-like [Jatropha curcas]
swissprot
ID Q84WQ5
description CBS domain-containing protein CBSX5 OS=Arabidopsis thaliana GN=CBSX5 PE=2 SV=2
trembl
ID A0A067JB04
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21418 PE=4 SV=1
Gene Ontology
ID GO:0005515
description cbs domain-containing protein cbsx5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27598: 145323-147591 , PASA_asmbl_27599: 145834-146389
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000264_160 0.0 - - PREDICTED: CBS domain-containing protein CBSX5-like [Jatropha curcas]
2 Hb_000152_650 0.0778151165 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
3 Hb_001123_340 0.0821586551 - - PREDICTED: uncharacterized protein LOC105123089 isoform X1 [Populus euphratica]
4 Hb_000431_080 0.0881659989 - - PREDICTED: uncharacterized protein LOC105632547 [Jatropha curcas]
5 Hb_003077_010 0.1091159837 - - PREDICTED: NAD(P)H-quinone oxidoreductase subunit O, chloroplastic isoform X1 [Jatropha curcas]
6 Hb_005365_040 0.1098289252 - - hypothetical protein JCGZ_15100 [Jatropha curcas]
7 Hb_104014_010 0.1171521555 - - PREDICTED: probable receptor-like protein kinase At5g39020 isoform X2 [Jatropha curcas]
8 Hb_054615_010 0.1173381825 - - Chromosome-associated kinesin KIF4A, putative [Ricinus communis]
9 Hb_002121_030 0.1190503802 - - Ribonuclease P protein subunit P38-related isoform 1 [Theobroma cacao]
10 Hb_001218_060 0.1193621592 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000051_150 0.1197219239 - - hypothetical protein CICLE_v10003316mg [Citrus clementina]
12 Hb_000187_100 0.1198257075 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
13 Hb_089736_010 0.1199296066 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 7 [Populus euphratica]
14 Hb_000574_380 0.1228220926 - - hydrolase, putative [Ricinus communis]
15 Hb_002799_120 0.1236520071 - - PREDICTED: uncharacterized protein LOC105141197 [Populus euphratica]
16 Hb_001369_590 0.1245485056 transcription factor TF Family: MYB hypothetical protein POPTR_0015s14600g [Populus trichocarpa]
17 Hb_004223_120 0.1274958456 - - PREDICTED: protein SPA, chloroplastic [Jatropha curcas]
18 Hb_006649_100 0.1276274431 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
19 Hb_001926_010 0.1276328848 - - hypothetical protein Csa_2G383910 [Cucumis sativus]
20 Hb_000347_170 0.1278466407 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]

Gene co-expression network

sample Hb_000264_160 Hb_000264_160 Hb_000152_650 Hb_000152_650 Hb_000264_160--Hb_000152_650 Hb_001123_340 Hb_001123_340 Hb_000264_160--Hb_001123_340 Hb_000431_080 Hb_000431_080 Hb_000264_160--Hb_000431_080 Hb_003077_010 Hb_003077_010 Hb_000264_160--Hb_003077_010 Hb_005365_040 Hb_005365_040 Hb_000264_160--Hb_005365_040 Hb_104014_010 Hb_104014_010 Hb_000264_160--Hb_104014_010 Hb_002121_030 Hb_002121_030 Hb_000152_650--Hb_002121_030 Hb_001369_590 Hb_001369_590 Hb_000152_650--Hb_001369_590 Hb_054615_010 Hb_054615_010 Hb_000152_650--Hb_054615_010 Hb_000152_650--Hb_104014_010 Hb_000152_650--Hb_005365_040 Hb_001218_060 Hb_001218_060 Hb_001123_340--Hb_001218_060 Hb_000282_010 Hb_000282_010 Hb_001123_340--Hb_000282_010 Hb_001926_010 Hb_001926_010 Hb_001123_340--Hb_001926_010 Hb_089736_010 Hb_089736_010 Hb_001123_340--Hb_089736_010 Hb_000187_100 Hb_000187_100 Hb_001123_340--Hb_000187_100 Hb_000431_080--Hb_000187_100 Hb_000431_080--Hb_005365_040 Hb_000431_080--Hb_001123_340 Hb_004223_120 Hb_004223_120 Hb_000431_080--Hb_004223_120 Hb_000431_080--Hb_001369_590 Hb_001606_040 Hb_001606_040 Hb_003077_010--Hb_001606_040 Hb_003077_010--Hb_001123_340 Hb_003077_010--Hb_104014_010 Hb_003077_010--Hb_089736_010 Hb_003077_010--Hb_001218_060 Hb_003077_010--Hb_002121_030 Hb_005365_040--Hb_001369_590 Hb_000051_150 Hb_000051_150 Hb_005365_040--Hb_000051_150 Hb_005365_040--Hb_000187_100 Hb_000160_260 Hb_000160_260 Hb_005365_040--Hb_000160_260 Hb_005365_040--Hb_002121_030 Hb_000084_210 Hb_000084_210 Hb_005365_040--Hb_000084_210 Hb_104014_010--Hb_000051_150 Hb_001913_070 Hb_001913_070 Hb_104014_010--Hb_001913_070 Hb_010422_020 Hb_010422_020 Hb_104014_010--Hb_010422_020 Hb_104014_010--Hb_001369_590 Hb_104014_010--Hb_005365_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.902879 17.4849 362.104 44.3009 0.113566 0.238386
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.63848 1.49921 2.6922 0.588787 76.9413

CAGE analysis